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@microbiomedata

National Microbiome Data Collaborative

National Microbiome Data Collaborative

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  1. nmdc-schema nmdc-schema Public

    National Microbiome Data Collaborative (NMDC) unified data model

    Python 27 8

  2. NMDC_documentation NMDC_documentation Public

    Document workflows, schemas, and portal

    2 3

Repositories

Showing 10 of 79 repositories
  • nmdc_automation Public

    Prototype automation

    microbiomedata/nmdc_automation’s past year of commit activity
    Python 2 2 32 1 Updated Nov 13, 2024
  • nmdc-schema Public

    National Microbiome Data Collaborative (NMDC) unified data model

    microbiomedata/nmdc-schema’s past year of commit activity
    Python 27 CC0-1.0 8 361 (1 issue needs help) 8 Updated Nov 13, 2024
  • issues Public

    public repo for issues related to NMDC work

    microbiomedata/issues’s past year of commit activity
    Jupyter Notebook 2 1 318 2 Updated Nov 13, 2024
  • external-metadata-awareness Public

    Tools for fetching and processing external schemas, ontologies and metadata records. Includes value set maintenance and some GitHub org exploration.

    microbiomedata/external-metadata-awareness’s past year of commit activity
    Python 0 0 11 3 Updated Nov 12, 2024
  • nmdc-server Public

    Data portal client and server for NMDC.

    microbiomedata/nmdc-server’s past year of commit activity
    Python 9 0 165 14 Updated Nov 12, 2024
  • submission-schema Public
    microbiomedata/submission-schema’s past year of commit activity
    Python 1 MIT 1 53 6 Updated Nov 12, 2024
  • nmdc-aggregator Public

    Scripts that periodically aggregate data related to KEGG search

    microbiomedata/nmdc-aggregator’s past year of commit activity
    Python 0 0 2 1 Updated Nov 12, 2024
  • nmdc-edge Public

    Web-based interface to the NMDC EDGE platform

    microbiomedata/nmdc-edge’s past year of commit activity
    JavaScript 4 0 70 (1 issue needs help) 0 Updated Nov 12, 2024
  • metaAssembly Public

    Workflow for metagenome assembly

    microbiomedata/metaAssembly’s past year of commit activity
    WDL 4 4 3 2 Updated Nov 12, 2024
  • nmdc-runtime Public

    Runtime system for NMDC data management and orchestration

    microbiomedata/nmdc-runtime’s past year of commit activity
    HTML 7 3 106 (2 issues need help) 14 Updated Nov 12, 2024
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