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1. gencorefacility/variant-calling-pipeline-gatk4 gencorefacility/variant-calling-pipeline-gatk4 Public

   Variant Calling Pipeline Using GATK4 and Nextflow

   Nextflow 52 48

2. gencorefacility/reform gencorefacility/reform Public

   Modify existing reference fasta and gff3/gtf files to include a new sequence

   Python 29 5

3. gencorefacility/r-notebooks gencorefacility/r-notebooks Public

   Gene Set Enrichment Analysis and Over Representation Analysis analysis using R

   17 25

4. gencorefacility/variant-calling-pipeline gencorefacility/variant-calling-pipeline Public

   HPC based pipelines for variant calling using GATK

   Shell 17 24

5. gencorefacility/covid19 gencorefacility/covid19 Public

   Variant Analysis Pipeline for COVID19

   Nextflow 4 1

6. NCBI-Hackathons/AssesSV NCBI-Hackathons/AssesSV Public

   HTML 7 1