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Docs: config/context.json #470

Merged
merged 1 commit into from
Mar 13, 2024
Merged

Docs: config/context.json #470

merged 1 commit into from
Mar 13, 2024

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joeflack4
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@joeflack4 joeflack4 commented Mar 12, 2024

Overview

Updates documentation concerning context.json needing to be edited when making a new source.

Updates

Docs: context.json
- Update: add-new-source.md with instructions on updating this file.

Pre-merge checklist

Documentation

Was the documentation added/updated under docs/?

  • Yes
  • No, updates to the docs were not necessary after careful consideration

QC

Was the full pipeline run before submitting this PR using sh run.sh make build-mondo-ingest on this branch (after
docker pull obolibrary/odkfull:dev), and no errors occurred?

  • Yes
  • No, there are no functional (code-related) changes to the pipeline in the PR, so no re-run is necessary

New Packages

Were any new Python packages added?

Were any other non-Python packages added?

PR Review and Conversations Resolved

Has the PR been sufficiently reviewed by at least 1 team member of the Mondo Technical team and all threads resolved?

  • Yes

- Update: add-new-source.md with instructions on updating this file.
@@ -25,6 +25,9 @@ Prefixes need to be entered in the following places in the yml:
### 2.3. `config/prefixes.csv`
Add prefixes.

### 2.4. `config/context.json`
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The update

@joeflack4 joeflack4 self-assigned this Mar 12, 2024
@joeflack4 joeflack4 added the documentation Improvements or additions to documentation label Mar 12, 2024
@@ -25,6 +25,9 @@ Prefixes need to be entered in the following places in the yml:
### 2.3. `config/prefixes.csv`
Add prefixes.

### 2.4. `config/context.json`
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@joeflack4 joeflack4 Mar 12, 2024

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Related issue(s)

I think this is a file that probably should be programmatically generated. So I:

  1. Updated Converter exporters mondolib#8 w/ context.json as new entry and updated plan, which will ideally follow:
  2. Created Exporters to support Monarch use cases biopragmatics/curies#106, in response to Charlie also agreeing that curies is a good place for this solution.

@joeflack4 joeflack4 mentioned this pull request Mar 12, 2024
9 tasks
@joeflack4 joeflack4 requested a review from twhetzel March 13, 2024 19:59
@joeflack4 joeflack4 merged commit cddd278 into develop Mar 13, 2024
@joeflack4 joeflack4 deleted the docs-context-json branch March 13, 2024 20:00
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2 participants