Synonym Sync - Redundant whitespace - mini build #739
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| @@ -4038,7 +4038,6 @@ MONDO:0010517 ciliary dyskinesia, primary, 36, X-linked oio:hasExactSynonym X-l | |||
| MONDO:0010517 ciliary dyskinesia, primary, 36, X-linked oio:hasExactSynonym primary ciliary dyskinesia 36 DOID:0111850 primary ciliary dyskinesia 36 primary ciliary dyskinesia 36 DOID:0111850 | |||
| MONDO:0010521 amelogenesis imperfecta type 1E oio:hasExactSynonym amelogenesis imperfecta type 1E DOID:0110058 amelogenesis imperfecta type 1E amelogenesis imperfecta type 1E DOID:0110058 | |||
| MONDO:0010522 X-linked amelogenesis imperfecta hypoplastic/hypomaturation 2 oio:hasExactSynonym X-linked amelogenesis imperfecta hypoplastic/hypomaturation 2 DOID:0110059 X-linked amelogenesis imperfecta hypoplastic/hypomaturation 2 X-linked amelogenesis imperfecta hypoplastic/hypomaturation 2 DOID:0110059 | |||
| MONDO:0010522 X-linked amelogenesis imperfecta hypoplastic/hypomaturation 2 oio:hasExactSynonym amelogenesis imperfecta type IE X-linked 2 DOID:0110059 X-linked amelogenesis imperfecta hypoplastic/hypomaturation 2 amelogenesis imperfecta type IE X-linked 2 DOID:0110059 | |||
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-added --> -confirmed
On MONDO:0010522 amelogenesis imperfecta type IE X-linked 2 exists, but DOID:0110059 had 2 spaces between "imperfecta" and "type". Now, instead of this showing up as an -added synonym, it is able to join on the existing Mondo synonym, so this entry now appears in -confirmed intead.
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Same thing for Ohdo syndrome, SBBYS variant, which is the only other removal in this DO file.
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One example of this in ORDO is Partial trisomy of chromosome Xq.
| MONDO:0008675 Freeman-Sheldon syndrome oio:hasExactSynonym distal arthrogryposis type 2A distal arthrogryposis type 2A distal arthrogryposis type 2a DOID:0111605 distal arthrogryposis type 2A distal arthrogryposis type 2A DOID:0111605 | ||
| MONDO:0008675 Freeman-Sheldon syndrome oio:hasExactSynonym distal arthrogryposis type 2A DOID:0111605 distal arthrogryposis type 2A distal arthrogryposis type 2A DOID:0111605 |
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Many (most?) diffs are spurious
This diff is not caused by the changes in this PR (#738). This is an example of a diff that is caused because of duplicate rows (sorting isn't set up to account for that), which results in some rows being shifted up or down a little bit.
Fixed in #720. Reviewing these synonym sync diffs will be a lot easier once that's merged.
| @@ -148,7 +148,7 @@ MONDO:0000680 astereognosia oio:hasExactSynonym tactile agnosia icd11.foundat | |||
| MONDO:0000680 astereognosia oio:hasExactSynonym tactile amnesia icd11.foundation:756147896 Astereognosia tactile amnesia icd11.foundation:756147896 | |||
| MONDO:0000687 diffuse alopecia areata oio:hasExactSynonym Diffuse alopecia areata icd11.foundation:666274267 Diffuse alopecia areata Diffuse alopecia areata icd11.foundation:666274267 | |||
| MONDO:0000690 body dysmorphic disorder oio:hasExactSynonym Body dysmorphic disorder icd11.foundation:731724655 Body dysmorphic disorder Body dysmorphic disorder icd11.foundation:731724655 | |||
| MONDO:0000698 gamma-amino butyric acid metabolism disorder oio:hasExactSynonym Disorders of GABA - [gamma aminobutyric acid] metabolism icd11.foundation:1811657969 Disorders of gamma aminobutyric acid metabolism Disorders of GABA - [gamma aminobutyric acid] metabolism icd11.foundation:1811657969 | |||
| MONDO:0000698 gamma-amino butyric acid metabolism disorder oio:hasExactSynonym Disorders of GABA - [gamma aminobutyric acid] metabolism icd11.foundation:1811657969 Disorders of gamma aminobutyric acid metabolism Disorders of GABA - [gamma aminobutyric acid] metabolism icd11.foundation:1811657969 | |||
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Modified -added entry
An extra space was removed from Disorders of GABA - [gamma aminobutyric acid] metabolism. This synonym doesn't yet exist in Mondo. If it did, this would be an example of an -added entry being moved into -confirmed. But since it doesn't exist in Mondo, the result is simply a modification of this row in-situ; the redundant space is removed.
There appear to be many such cases of this in icd11foundation.
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- Update: Re-ran combined file. For some reason, it did not seem to run the first time correctly.
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Mini build for:
This was run back to back and shows just the output changes as a result of code changes.