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disease-gene-relationships-qc.tsv
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- Update: This file is now a release artefact
- Rename: Added -qc at the end of the file name
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joeflack4 committed Dec 18, 2024
1 parent 20f7580 commit d3bf9e3
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Showing 2 changed files with 4 additions and 3 deletions.
3 changes: 2 additions & 1 deletion .github/workflows/buid_and_release.yml
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Expand Up @@ -38,7 +38,8 @@ jobs:
title: "${{ steps.current-time.outputs.formattedTime }}"
prerelease: false
files: |
disease-gene-relationships-qc.tsv
mondo-omim-genes.robot.tsv
omim.owl
omim.sssom.tsv
mondo-omim-genes.robot.tsv
review.tsv
4 changes: 2 additions & 2 deletions makefile
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Expand Up @@ -2,7 +2,7 @@


# MAIN COMMANDS / GOALS ------------------------------------------------------------------------------------------------
all: omim.ttl omim.sssom.tsv omim.owl mondo-omim-genes.robot.tsv
all: omim.ttl omim.sssom.tsv omim.owl mondo-omim-genes.robot.tsv disease-gene-relationships-qc.tsv

# build: Create new omim.ttl
omim.ttl:
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python -m omim2obo.mondo_omim_genes_robot_tsv --inpath $< --outpath $@

# Ad hoc: Create a TSV of MIM-RO-MIM Gene-to-Disease realtions in omim.ttl
disease-gene-relationships.tsv: omim.ttl
disease-gene-relationships-qc.tsv: omim.ttl
robot query -i $< --query sparql/disease-gene-relationships.sparql $@

cleanup:
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