energy_barrier_problem

DNA energy barrier problem solver and sample generator using Google OR-Tools

Environment values

NUMBER_OF_THREADS

number of threads to use for the solver

NUMBER_OF_VERTICES

number of vertices in the sample graph

NUMBER_OF_SAMPLES

number of output samples to generate

MIN_NUMBER_OF_EDGES

minimum number of edges in the graph during generation phase

MAX_NUMBER_OF_EDGES

maximum number of edges in the graph  during generation phase

DB_NAME

name of the database

Build the project

docker compose build

Run the project

docker compose up [-d]