rework to use negative sig_thresh values #252
Workflow file for this run
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name: Tests | |
on: [push, pull_request] | |
jobs: | |
tests: | |
env: | |
ENV_NAME: SSINS_tests | |
PYTHON: ${{ matrix.python-version }} | |
OS: ${{ matrix.os }} | |
name: Testing | |
runs-on: ${{ matrix.os }} | |
defaults: | |
run: | |
# Adding -l {0} helps ensure conda can be found properly. | |
shell: bash -l {0} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ubuntu-latest, macos-latest, windows-latest] | |
python-version: [3.9, "3.10", "3.11", "3.12"] | |
steps: | |
- uses: actions/checkout@master | |
with: | |
fetch-depth: 1 | |
- name: Setup Miniconda | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
auto-update-conda: true | |
miniconda-version: "latest" | |
python-version: ${{ env.PYTHON }} | |
environment-file: ci/${{ env.ENV_NAME }}.yml | |
activate-environment: ${{ env.ENV_NAME }} | |
- name: Conda Info | |
run: | | |
conda info -a | |
conda list | |
PYVER=`python -c "import sys; print('{:d}.{:d}'.format(sys.version_info.major, sys.version_info.minor))"` | |
if [[ $PYVER != ${{ env.PYTHON }} ]]; then | |
exit 1; | |
fi | |
- name: Install | |
run: | | |
pip install . | |
- name: Run Tests | |
run: | | |
python -m pytest --cov=SSINS --cov-config=.coveragerc --cov-report xml:./coverage.xml --junitxml=test-reports/xunit.xml | |
- name: Doc Tests | |
run: | | |
python -m pytest docs/tutorial.rst | |
- name: Upload Coverage | |
uses: codecov/codecov-action@v1 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} # not required for public repos | |
files: ./coverage.xml | |
verbose: true |