Skip to content

nagoue/usegalaxy-eu-tools

 
 

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

UseGalaxy tools

There are a couple separate lists of tools contained here. The sum total of them make up the set of tools installed in UseGalaxy.eu

File Tools
asaim
epigenetics
graphclust
metabolomics
tools_galaxyp Proteomics Tools
tools_iuc Most of the tools maintained by IUC. We aren't currently planning on automatically adding all the tools from IUC but we may reconsider this later.
tools Tools not contained in one of the other files.

Installation

export PATH=/usr/local/tools/_conda/bin/:$PATH
source activate ephemeris
shed-tools install -a $GALAXY_API_KEY --galaxy https://galaxy.uni-freiburg.de -t tools.yaml

Install of a Single Tool

shed-tools install -a $GALAXY_API_KEY --galaxy https://galaxy.uni-freiburg.de --name annotatemyids --owner iuc --section_label 'Annotation'

Releases

No releases published

Packages

No packages published

Languages

  • Python 74.1%
  • Makefile 17.4%
  • Shell 8.5%