Skip to content

Commit

Permalink
README: add some example references
Browse files Browse the repository at this point in the history
  • Loading branch information
schlegelp committed Oct 16, 2023
1 parent 436c1f7 commit 1966f36
Showing 1 changed file with 22 additions and 2 deletions.
24 changes: 22 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@

<img src="https://github.com/navis-org/navis/raw/master/docs/_static/favicon.png" height="60">

NAVis is a Python 3 (3.8 or later) library for **N**euron **A**nalysis and **Vis**ualization.
NAVis is a Python 3 library for **N**euron **A**nalysis and **Vis**ualization.

## Documentation
NAVis is on [ReadTheDocs](http://navis.readthedocs.io/ "NAVis ReadTheDocs").
Expand Down Expand Up @@ -64,8 +64,28 @@ libraries built on top of NAVis:
* [pymaid](https://pymaid.readthedocs.io/en/latest/) pulls and pushes data from/to CATMAID servers
* [fafbseg](https://fafbseg-py.readthedocs.io/en/latest/index.html) contains tools to work with auto-segmented data for the FAFB EM dataset including FlyWire

## Who uses NAVis?
NAVis has been used in a range of neurobiological publications. Here's a semi-random sample
of recent papers:

```
BIFROST: a method for registering diverse imaging datasets, Brezovec et al., bioRxiv (2023); doi: https://doi.org/10.1101/2023.06.09.544408
Vimo: Visual Analysis of Neuronal Connectivity Motifs, Troidl et al., bioRxiv (2022); doi: https://doi.org/10.1101/2022.12.09.519772
Information flow, cell types and stereotypy in a full olfactory connectome, Schlegel, Bates et al., eLife (2021); doi: https://doi.org/10.7554/eLife.66018
Synaptic wiring motifs in posterior parietal cortex support decision-making, Kuan et al., bioRxiv (2022); doi: https://doi.org/10.1101/2022.04.13.488176
```

Want to see your work listed here? Open an [Issue](https://github.com/navis-org/navis/issues) and tell us about it!

## Citing NAVis
We'd love to know if you found NAVis useful for your research! You can help us
spread the word by citing the DOI provided by Zenodo [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.8191725.svg)](https://zenodo.org/doi/10.5281/zenodo.4699382)

## License
This code is under GNU GPL V3
This code is under [GNU GPL V3](LICENSE).

## Acknowledgments
NAVis is inspired by and inherits much of its design from the excellent
Expand Down

0 comments on commit 1966f36

Please sign in to comment.