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docs: couple small fixes/improvements
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schlegelp committed Oct 28, 2023
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6 changes: 4 additions & 2 deletions docs/source/gallery.rst
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Expand Up @@ -132,5 +132,7 @@ function. There you will also find more examples.
Troubleshooting <troubleshooting>


Not seeing what you're looking for, need additional pointers or found a broken
example? Open an `issue <https://github.com/navis-org/navis/issues>`_ on Github!
Not seeing what you're looking for? Need additional pointers? Found a broken
example? Open an `issue <https://github.com/navis-org/navis/issues>`_ or
use `discussions <https://github.com/navis-org/navis/discussions>`_ on Github
to ask questions!
28 changes: 17 additions & 11 deletions docs/source/whats_new.rst
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Expand Up @@ -18,19 +18,25 @@ repository.
* - dev
- ongoing
- - Additions:
- new property ``Treenode.surface_area``
- new functions :func:`navis.read_parquet` and :func:`navis.write_parquet` store skeletons and dotprops in parquet files (see `here <https://github.com/navis-org/navis/blob/master/navis/io/pq_io.md>`_ for format specs and benchmarks)
- new :func:`navis.read_nml` function to read single NML file (complements existing :func:`navis.read_nmx` files which are collections of NMLs)
- new property ``Treenode.surface_area``
- new functions :func:`navis.read_parquet` and :func:`navis.write_parquet`
store skeletons and dotprops in parquet files (see
`here <https://github.com/navis-org/navis/blob/master/navis/io/pq_io.md>`_
for format specs and benchmarks)
- new :func:`navis.read_nml` function to read single NML file (complements
existing :func:`navis.read_nmx` files which are collections of NMLs)
- Improvements:
- made adding recordings to ``CompartmentModel`` faster
- improved logic for splitting NBLAST across cores
- :func:`navis.xform_brain`: now allows to specify multiple intermediate template spaces through the ``via`` parameter and to ignore spaces through the ``avoid`` parameter
- made adding recordings to ``CompartmentModel`` faster
- improved logic for splitting NBLAST across cores
- :func:`navis.xform_brain`: now allows to specify multiple intermediate
template spaces through the ``via`` parameter and to ignore spaces
through the ``avoid`` parameter
- Fixes:
- fixed interface to InsectBrainDB
- :func:`navis.read_precomputed` now correctly parses the `info` file depending on the source
- fixed writing vertex properties in :func:`navis.write_precomputed`
- fixed an occasional issue when plotting skeletons with radii
- fix bug in :func:`navis.subset_neuron` that caused connectors to be dropped when using mask
- fixed interface to InsectBrainDB
- :func:`navis.read_precomputed` now correctly parses the `info` file depending on the source
- fixed writing vertex properties in :func:`navis.write_precomputed`
- fixed an occasional issue when plotting skeletons with radii
- fix bug in :func:`navis.subset_neuron` that caused connectors to be dropped when using mask
* - 1.5.0
- 27/07/23
- - BREAKING: dropped support for Python 3.7
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