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v2.3.3

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@johnbraisted johnbraisted released this 13 Oct 18:54
· 493 commits to main since this release
de082d9

This patch release has the following improvements:

  • The pathway enrichment code has been enhanced to improve performance on large input analyte lists, decreasing execution time by roughly 60%.
  • This release also features Rhea Reaction queries where analyte lists consisting of proteins, metabolites or a combination of both can be entered, resulting in a list of associated Rhea Reactions. The result of this query will be a set of three reaction lists, one for reactions associated with metabolites, one reaction list associated with entered genes or proteins, and one reaction list that lists reactions that are in common. The reactions in this third list will list reactions in which there is an association with at least on metabolite and one protein from the input list.