stxtyper --debug

ncbi · Dec 18, 2024 · 24ec79d · 24ec79d
1 parent 2c838b6
commit 24ec79d
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/test_stxtyper.sh b/test_stxtyper.sh
@@ -58,7 +58,7 @@ function test_input_file {
 
     TESTS=$(( $TESTS + 1 ))
 
-    if ! $STXTYPER $options -n "test/$test_base.fa" > "test/$test_base.got"
+    if ! $STXTYPER $options -n "test/$test_base.fa" --debug  > "test/$test_base.got"
     then
         echo "${red}not ok: $STXTYPER returned a non-zero exit value indicating a failure of the software${reset}"
         echo "#  $STXTYPER $options -n test/$test_base.fa > test/$test_base.got"