Merge pull request #747 from nci/main #1747

	# This workflow will install Python dependencies, run tests and lint with a single version of Python
	# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python

	name: Unit Tests

	on:
	[push, pull_request]

	permissions:
	contents: read

	jobs:
	build:

	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ["3.10", "3.11", "3.12", "3.13"]

	steps:
	- uses: actions/checkout@v4
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v5
	with:
	python-version: ${{ matrix.python-version }}

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install .[all]
	- name: Test with pytest
	run: \|
	# editable is necessary as pytest will run against the installed
	# package rather than the local files creating a coverage report of 0%
	pip install -e .
	pytest tests/ --cov=src/
	- name: Test tutorial notebooks with pytest
	run: \|
	pytest --nbmake tutorials/
	- name: Coveralls GitHub Action
	uses: coverallsapp/[email protected]
	with:
	flag-name: run-${{ join(matrix.*, '-') }}
	parallel: true
	finish:
	needs: build
	runs-on: ubuntu-latest
	steps:
	- name: Indicate Coveralls Parallel Finished
	uses: coverallsapp/[email protected]
	with:
	parallel-finished: true

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