Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Refine workflow tutorial content from Augur #50

Draft
wants to merge 1 commit into
base: master
Choose a base branch
from

Conversation

huddlej
Copy link
Contributor

@huddlej huddlej commented Mar 1, 2021

Adds a copy of the original Snakemake-based Zika tutorial from the Augur repository. This is part of an effort to refine the content of the Zika and TB tutorials to better introduce the concept of bioinformatics workflows with Snakemake and justify their use. This content provides a bridge from the first Zika tutorial that focuses on Augur commands on the shell and the SARS-CoV-2 tutorial that focuses on configuring a sophisticated Snakemake workflow through YAML files.

Adds a copy of the original Snakemake-based Zika tutorial from the Augur
repository. This is part of an effort to refine the content of the Zika
and TB tutorials to better introduce the concept of bioinformatics
workflows with Snakemake and justify their use. This content provides a
bridge from the first Zika tutorial that focuses on Augur commands on
the shell and the SARS-CoV-2 tutorial that focuses on configuring a
sophisticated Snakemake workflow through YAML files.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant