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21 Open 71 Closed
21 Open 71 Closed
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Issues list

Double check that for all protocols, sequences with different Cprimers (isotypes) are not collapsed when collapsing duplicates bug Something isn't working
#356 opened Oct 23, 2024 by ggabernet
move contaminant sequence detection to before collapsing duplicates enhancement New feature or request
#355 opened Oct 23, 2024 by ggabernet
modify pRESTO collapseseq process to keep UMI annotations enhancement New feature or request
#354 opened Oct 23, 2024 by ggabernet
Enhancements for TCR analysis (locus TR) enhancement New feature or request
#353 opened Oct 19, 2024 by ggabernet
3 tasks
Add UMI barcode diversity reporting enhancement New feature or request
#352 opened Oct 19, 2024 by ggabernet
Filtering sequences belonging to the loci specified in the samplesheet only enhancement New feature or request
#351 opened Oct 19, 2024 by ggabernet
New bulk 5'-RACE supported protocol, rescue non-overlaping reads and IgBlast 19 columns format enhancement New feature or request
#342 opened Aug 5, 2024 by JustBioinfo
Incorrect number of sequences bug Something isn't working
#340 opened Jun 24, 2024 by eba28
Add the calculations of physicochemical properties from alakazam enhancement New feature or request
#326 opened Apr 22, 2024 by JustBioinfo
Fetch other databases than IMGT: AIRR reference set enhancement New feature or request
#300 opened Jan 22, 2024 by ggabernet
Add regions translations to final repertoire table enhancement New feature or request
#298 opened Jan 18, 2024 by ggabernet
Report findthreshold should report chosen threshold enhancement New feature or request
#272 opened Jul 3, 2023 by ggabernet 3.2
samplesheet check make character bug Something isn't working
#271 opened Jul 3, 2023 by ggabernet 3.2
Test data enhancement New feature or request
#253 opened Apr 21, 2023 by ggabernet 3.2
@ggabernet
Add remaining R scripts to EnchantR enhancement New feature or request
#246 opened Mar 14, 2023 by ggabernet
3 tasks
Add metada should add only metadata columns needed for the analyses enhancement New feature or request
#230 opened Feb 13, 2023 by ssnn-airr
Report primers in airrflow report enhancement New feature or request
#193 opened Oct 25, 2022 by ggabernet
Fetch databases separate from build igblast reference enhancement New feature or request
#131 opened Aug 12, 2021 by ggabernet 3.2
check version of downloaded databases enhancement New feature or request
#96 opened Mar 23, 2021 by ggabernet
1
include process to estimate error enhancement New feature or request
#64 opened Jan 25, 2020 by ggabernet
Include other define clones algorithms enhancement New feature or request
#28 opened Apr 8, 2019 by ggabernet
ProTip! no:milestone will show everything without a milestone.