Merge pull request #154 from nf-core/circexplorer2-counts

Fix circexplorer2 count location
nf-core · Jun 27, 2024 · 4a2d30f · 4a2d30f
2 parents 8fce8c2 + 34a3a80
commit 4a2d30f
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/conf/modules.config b/conf/modules.config
@@ -263,7 +263,7 @@ process {
     }
 
     withName: '.*:CIRCEXPLORER2:UNIFY' {
-        ext.args = "-v FS='\\t' -v OFS='\\t' '{ print \$1, \$2, \$3, \$1 \":\" \$2 \"-\" \$3 \":\" \$6, \$10, \$6 }'"
+        ext.args = "-v FS='\\t' -v OFS='\\t' '{ print \$1, \$2, \$3, \$1 \":\" \$2 \"-\" \$3 \":\" \$6, \$13, \$6 }'"
         ext.suffix = "circexplorer2.bed"
         publishDir = [
             path: { "${params.outdir}/circrna_discovery/circexplorer2/${meta.id}" },