Important! Template update for nf-core/tools v2.12 #719
Aratzlinting.yml
on: pull_request
pre-commit
12s
nf-core
57s
Annotations
11 errors and 1 warning
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pre-commit
Process completed with exit code 1.
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BCL-CONVERT:
BCL-CONVERT#L1
Assertion failed:
2 of 5 assertions failed
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SGDEMUX:
SGDEMUX#L1
Assertion failed:
1 of 54 assertions failed
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Skip Trimming:
Skip Trimming#L1
Assertion failed:
1 of 5 assertions failed
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Skip Fastp:
Skip Fastp#L1
Assertion failed:
1 of 5 assertions failed
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Skip Fastqc:
Skip Fastqc#L1
Assertion failed:
1 of 5 assertions failed
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Skip Fastp & Fastqc:
Skip Fastp & Fastqc#L1
Assertion failed:
1 of 5 assertions failed
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Skip MultiQC:
Skip MultiQC#L1
Assertion failed:
1 of 5 assertions failed
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FQTK:
FQTK#L1
Assertion failed:
1 of 54 assertions failed
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Bases2Fastq:
Bases2Fastq#L1
Assertion failed:
1 of 7 assertions failed
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Bcl2Fastq:
Bcl2Fastq#L1
Assertion failed:
1 of 5 assertions failed
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nf-core
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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linting-logs
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