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Merge pull request #271 from nf-core/fix-release
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Fix release
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grst authored Oct 7, 2024
2 parents dd3304c + 745e77a commit 774f773
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8 changes: 4 additions & 4 deletions CHANGELOG.md
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The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## 1.5.2dev (UNRELEASED)
## 1.5.2 - 2024-10-07

### `Changed`

- [#253](https://github.com/nf-core/demultiplex/pull/256) Updated all modules and subworkflows, and added new bclconvert test profile.
- [#263](https://github.com/nf-core/demultiplex/pull/263) Updated all modules and subworkflows, and added new bclconvert test profile.

## 1.5.1
## 1.5.1 - 2024-08-20

### `Fixed`

- [#253](https://github.com/nf-core/demultiplex/pull/253) Fixed mkfastq output channels.
- [#264](https://github.com/nf-core/demultiplex/pull/264) Fixed adapter removal for input samplesheets without lane information.
- [#265](https://github.com/nf-core/demultiplex/pull/265) Fixed adapter removal for input samplesheets without lane information.

## 1.5.0 - 2024-08-12

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2 changes: 1 addition & 1 deletion tests/pipeline/bases2fastq.nf.test.snap
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{
"software_versions": {
"content": [
"{BASES2FASTQ={bases2fastq=1.8.0.1260801529, use subject to license available at elementbiosciences.com}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{BASES2FASTQ={bases2fastq=1.8.0.1260801529, use subject to license available at elementbiosciences.com}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
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2 changes: 1 addition & 1 deletion tests/pipeline/bcl2fastq.nf.test.snap
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{
"software_versions": {
"content": [
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
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4 changes: 2 additions & 2 deletions tests/pipeline/bclconvert.nf.test.snap
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},
"software_versions": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.8.4",
Expand All @@ -48,4 +48,4 @@
},
"timestamp": "2024-10-02T20:50:32.184940324"
}
}
}
4 changes: 2 additions & 2 deletions tests/pipeline/bclconvert_mini.nf.test.snap
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},
"software_versions": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.8.4",
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},
"timestamp": "2024-10-03T12:19:24.749587693"
}
}
}
2 changes: 1 addition & 1 deletion tests/pipeline/fqtk.nf.test.snap
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},
"software_versions": {
"content": [
"{CSV2TSV={sed=4.8}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, FQTK={fqtk=0.2.1}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{CSV2TSV={sed=4.8}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, FQTK={fqtk=0.2.1}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
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8 changes: 4 additions & 4 deletions tests/pipeline/kraken.nf.test.snap
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"laneBarcode.html:md5,2bbdae3ee57151eab520c966597d7438"
],
[

]
]
],
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"laneBarcode.html:md5,48842c23b9a2816aec540177df870968"
],
[

]
]
]
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},
"software_versions": {
"content": [
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, KRAKEN2={kraken2=2.1.3, pigz=2.8}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, KRAKEN2={kraken2=2.1.3, pigz=2.8}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
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},
"timestamp": "2024-10-02T20:52:55.269657852"
}
}
}
2 changes: 1 addition & 1 deletion tests/pipeline/mkfastq.nf.test.snap
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{
"software_versions": {
"content": [
"{CELLRANGER_MKFASTQ={cellranger=8.0.0}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{CELLRANGER_MKFASTQ={cellranger=8.0.0}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
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2 changes: 1 addition & 1 deletion tests/pipeline/sgdemux.nf.test.snap
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{
"software_versions": {
"content": [
"{FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, SGDEMUX={sgdemux=1.1.1}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, SGDEMUX={sgdemux=1.1.1}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
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10 changes: 5 additions & 5 deletions tests/pipeline/skip_tools.nf.test.snap
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{
"software_versions_skip_trimming": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
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},
"software_versions_skip_fastqc": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
Expand All @@ -125,7 +125,7 @@
},
"software_versions_skip_fastp_fastqc": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
Expand All @@ -135,7 +135,7 @@
},
"software_versions_skip_multiqc": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
Expand All @@ -145,7 +145,7 @@
},
"software_versions_skip_fastp": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
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2 changes: 1 addition & 1 deletion tests/pipeline/test_pe.nf.test.snap
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Expand Up @@ -66,7 +66,7 @@
},
"software_versions": {
"content": [
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.1}}"
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.2}}"
],
"meta": {
"nf-test": "0.9.0",
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