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Move test data from pipeline to testdatasets #123

Merged
merged 8 commits into from
Jun 5, 2023
Merged

Move test data from pipeline to testdatasets #123

merged 8 commits into from
Jun 5, 2023

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drpatelh
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@drpatelh drpatelh commented Jun 5, 2023

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github-actions bot commented Jun 5, 2023 •
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nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit 7d6ccfd

+| ✅ 156 tests passed       |+
#| ❔   1 tests were ignored |#
!| ❗   5 tests had warnings |!

❗ Test warnings:

  • nextflow_config - Config manifest.version should end in dev: '1.3.1'
  • pipeline_todos - TODO string in README.md: Describe the minimum required steps to execute the pipeline, e.g. how to prepare samplesheets.
  • pipeline_todos - TODO string in methods_description_template.yml: #Update the HTML below to your prefered methods description, e.g. add publication citation for this pipeline
  • pipeline_todos - TODO string in awsfulltest.yml: You can customise AWS full pipeline tests as required
  • schema_description - No description provided in schema for parameter: skip_tools

❔ Tests ignored:

✅ Tests passed:

Run details

  • nf-core/tools version 2.8
  • Run at 2023-06-05 11:08:11

@drpatelh drpatelh mentioned this pull request Jun 5, 2023
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@drpatelh drpatelh merged commit 9845a5b into nf-core:dev Jun 5, 2023
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@maxulysse maxulysse maxulysse approved these changes

@nh13 nh13 Awaiting requested review from nh13 nh13 is a code owner

@sam-white04 sam-white04 Awaiting requested review from sam-white04 sam-white04 is a code owner

@blajoie blajoie Awaiting requested review from blajoie blajoie is a code owner

@matthdsm matthdsm Awaiting requested review from matthdsm

@edmundmiller edmundmiller Awaiting requested review from edmundmiller

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@drpatelh @maxulysse