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Bump Release PR for 1.5.0 #241

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merged 3 commits into from
Aug 12, 2024
+24 −24
Merged

Bump Release PR for 1.5.0 #241

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c31a90d
Bump Release PR
apeltzer Aug 12, 2024
d4683bd
Added Gregor/myself [skip ci]
apeltzer Aug 12, 2024
5d118e5
Typo
apeltzer Aug 12, 2024
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4 changes: 1 addition & 3 deletions CHANGELOG.md
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Expand Up @@ -3,9 +3,7 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## [Unpublished Version / DEV]

## 1.5.0
## 1.5.0 - 2024-08-12

### `Added`

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2 changes: 2 additions & 0 deletions README.md
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Expand Up @@ -114,6 +114,8 @@ We thank the following people for their extensive assistance in the development
- [`@atrigila`](https://github.com/atrigila)
- [`@nschcolnicov`](https://github.com/nschcolnicov)
- [`@aratz`](https://github.com/aratz)
- [`@grst`](https://github.com/grst)
- [`@apeltzer`](https://github.com/apeltzer)

## Contributions and Support

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4 changes: 2 additions & 2 deletions assets/multiqc_config.yml
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@@ -1,8 +1,8 @@
report_comment: >

This report has been generated by the <a href="https://github.com/nf-core/demultiplex/tree/dev" target="_blank">nf-core/demultiplex</a>
This report has been generated by the <a href="https://github.com/nf-core/demultiplex/releases/tag/1.5.0" target="_blank">nf-core/demultiplex</a>
analysis pipeline. For information about how to interpret these results, please see the
<a href="https://nf-co.re/demultiplex/dev/docs/output" target="_blank">documentation</a>.
<a href="https://nf-co.re/demultiplex/1.5.0/docs/output" target="_blank">documentation</a>.

report_section_order:
"nf-core-demultiplex-methods-description":
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -275,7 +275,7 @@ manifest {
description = """Demultiplexing pipeline for Illumina sequencing data"""
mainScript = 'main.nf'
nextflowVersion = '!>=23.04.0'
version = '1.5.0dev'
version = '1.5.0'
doi = '10.5281/zenodo.7153103'
}

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4 changes: 2 additions & 2 deletions tests/pipeline/bases2fastq.nf.test.snap
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{
"software_versions": {
"content": [
"{BASES2FASTQ={bases2fastq=1.8.0.1260801529, use subject to license available at elementbiosciences.com}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{BASES2FASTQ={bases2fastq=1.8.0.1260801529, use subject to license available at elementbiosciences.com}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
Expand All @@ -22,4 +22,4 @@
},
"timestamp": "2024-08-06T15:54:30.125104"
}
}
}
8 changes: 4 additions & 4 deletions tests/pipeline/bcl2fastq.nf.test.snap
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{
"software_versions": {
"content": [
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
Expand All @@ -24,7 +24,7 @@
"laneBarcode.html:md5,2bbdae3ee57151eab520c966597d7438"
],
[

]
]
],
Expand All @@ -45,7 +45,7 @@
"laneBarcode.html:md5,48842c23b9a2816aec540177df870968"
],
[

]
]
]
Expand Down Expand Up @@ -82,4 +82,4 @@
},
"timestamp": "2024-08-08T20:43:42.016587995"
}
}
}
4 changes: 2 additions & 2 deletions tests/pipeline/bclconvert.nf.test.snap
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Expand Up @@ -28,7 +28,7 @@
},
"software_versions": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.8.4",
Expand All @@ -48,4 +48,4 @@
},
"timestamp": "2024-08-01T14:51:11.574966834"
}
}
}
2 changes: 1 addition & 1 deletion tests/pipeline/fqtk.nf.test.snap
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Expand Up @@ -11,7 +11,7 @@
},
"software_versions": {
"content": [
"{CSV2TSV={sed=4.8}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, FQTK={fqtk=0.2.1}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{CSV2TSV={sed=4.8}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, FQTK={fqtk=0.2.1}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
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2 changes: 1 addition & 1 deletion tests/pipeline/kraken.nf.test.snap
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Expand Up @@ -63,7 +63,7 @@
},
"software_versions": {
"content": [
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, KRAKEN2={kraken2=2.1.3, pigz=2.8}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, KRAKEN2={kraken2=2.1.3, pigz=2.8}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
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2 changes: 1 addition & 1 deletion tests/pipeline/mkfastq.nf.test.snap
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@@ -1,7 +1,7 @@
{
"software_versions": {
"content": [
"{CELLRANGER_MKFASTQ={cellranger=8.0.0}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{CELLRANGER_MKFASTQ={cellranger=8.0.0}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
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2 changes: 1 addition & 1 deletion tests/pipeline/sgdemux.nf.test.snap
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{
"software_versions": {
"content": [
"{FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, SGDEMUX={sgdemux=1.1.1}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, SGDEMUX={sgdemux=1.1.1}, UNTAR_FLOWCELL={untar=1.34}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
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10 changes: 5 additions & 5 deletions tests/pipeline/skip_tools.nf.test.snap
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{
"software_versions_skip_trimming": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
Expand Down Expand Up @@ -115,7 +115,7 @@
},
"software_versions_skip_fastqc": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
Expand All @@ -125,7 +125,7 @@
},
"software_versions_skip_fastp_fastqc": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
Expand All @@ -135,7 +135,7 @@
},
"software_versions_skip_multiqc": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
Expand All @@ -145,7 +145,7 @@
},
"software_versions_skip_fastp": {
"content": [
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{BCLCONVERT={bclconvert=4.3.6}, FALCO={falco=1.2.1}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
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2 changes: 1 addition & 1 deletion tests/pipeline/test_pe.nf.test.snap
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Expand Up @@ -66,7 +66,7 @@
},
"software_versions": {
"content": [
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0dev}}"
"{BCL2FASTQ={bcl2fastq=2.20.0.422}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, MD5SUM={md5sum=8.3}, Workflow={nf-core/demultiplex=v1.5.0}}"
],
"meta": {
"nf-test": "0.9.0",
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