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15 Open 135 Closed
15 Open 135 Closed
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Issues list

How to speed up MMseqs2 taxonomy assignment with GTDB database on large contigs? question Further information is requested
#424 opened Oct 18, 2024 by lucianhu
1
DRAMP download error bug Something isn't working
#423 opened Oct 11, 2024 by jasmezz
3
Update all 'ubuntu' containers to the same enhancement Improvement for existing functionality
#419 opened Oct 9, 2024 by jfy133
nf-test wishlist enhancement Improvement for existing functionality
#398 opened Jul 8, 2024 by jasmezz
5 tasks
2.1 - Egyptian Koshari
Consider allowing annotation to run even if downstream screening not run enhancement Improvement for existing functionality
#392 opened Jul 3, 2024 by jfy133
1
A uniform input for all tools in each screening workflow enhancement Improvement for existing functionality
#385 opened Jun 5, 2024 by m3hdad
2
improving tool documentation & adding tests enhancement Improvement for existing functionality
#383 opened Jun 4, 2024 by ewissel
1
AMPLIFY_PREDICT exits with a ValueError while checking input bug Something isn't working
#373 opened May 5, 2024 by m3hdad
1
Add BAKTA results to MultiQC enhancement Improvement for existing functionality
#339 opened Feb 14, 2024 by jfy133
Add module: resfinder enhancement Improvement for existing functionality
#330 opened Jan 23, 2024 by jasmezz
Adapt deepBGC to use GPUs enhancement Improvement for existing functionality
#326 opened Dec 19, 2023 by Darcy220606
4
Add pharokka to nf-core/funcscan feature-request Request for a new pipeline feature
#329 opened Dec 15, 2023 by CarsonJM
@CarsonJM
Benchmarking tests showing resource values are suboptimal bug Something isn't working low-priority
#292 opened Jul 5, 2023 by jfy133
Consider adding annotation tools to MultiQC report enhancement Improvement for existing functionality
#277 opened May 24, 2023 by jfy133
@louperelo
Consider passing the annotation tool output to modules input for more standardization
#179 opened Dec 21, 2022 by Darcy220606
4 tasks
ProTip! What’s not been updated in a month: updated:<2024-09-30.