Merge pull request #567 from nf-core/bump-version-for-reelase

Bump version for 2.5.2 reelase

CHANGELOG.md

@@ -3,24 +3,26 @@
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
-## dev - [unreleased]
+## 2.5.2 - [2024-02-02]
 
 ### `Added`
 
-- [#548](https://github.com/nf-core/mag/pull/548) - Fixes to (reported by @maxibor, @PPpissar, @muniheart, @llborcard, fix by @maxibor)
-  - GTDBK-TK execution
-  - CAT/QUAST/DEPTH bin summary file name collisions
-  - BUSCO database parsing
-  - Correct CAT name files
 - [#562](https://github.com/nf-core/mag/pull/562) - Add CAT summary into the global bin_summary (by @maxibor)
-- [#565](https://github.com/nf-core/mag/pull/565) - Add warning of empty GTDB-TK results if no contigs pass completeness filter (fix by @jfy133 and @maxibor)
+- [#565](https://github.com/nf-core/mag/pull/565) - Add warning of empty GTDB-TK results if no contigs pass completeness filter (by @jfy133 and @maxibor)
 
 ### `Changed`
 
+- [#563](https://github.com/nf-core/mag/pull/562) Update to nf-core v2.12 `TEMPLATE` (by @CarsonJM)
+- [#566](https://github.com/nf-core/mag/pull/566) - More logical ordering of MultiQC sections (assembly and bin sections go together respectively) (fix by @jfy133)
+
 ### `Fixed`
 
+- [#548](https://github.com/nf-core/mag/pull/548) - Fixes to (reported by @maxibor, @PPpissar, @muniheart, @llborcard, fix by @maxibor)
+  - GTDBK-TK execution
+  - CAT/QUAST/DEPTH bin summary file name collisions
+  - BUSCO database parsing
+  - Correct CAT name files
 - [#558](https://github.com/nf-core/mag/pull/558) - Fix bug in run merging when dealing with single end data (reported by @roberta-davidson, fix by @jfy133)
-- [#566](https://github.com/nf-core/mag/pull/566) - More logical ordering of MultiQC sections (assembly and bin sections go together respectively) (fix by @jfy133)
 
 ### `Dependencies`
 

assets/multiqc_config.yml

@@ -1,7 +1,7 @@
 report_comment: >
-  This report has been generated by the <a href="https://github.com/nf-core/mag/tree/dev" target="_blank">nf-core/mag</a>
+  This report has been generated by the <a href="https://github.com/nf-core/mag/releases/tag/2.5.2" target="_blank">nf-core/mag</a>
   analysis pipeline. For information about how to interpret these results, please see the
-  <a href="https://nf-co.re/mag/dev/docs/output" target="_blank">documentation</a>.
+  <a href="https://nf-co.re/mag/2.5.2/docs/output" target="_blank">documentation</a>.
 report_section_order:
   "nf-core-mag-methods-description":
     order: -1000

nextflow.config

@@ -379,7 +379,7 @@ manifest {
     description     = """Assembly, binning and annotation of metagenomes"""
     mainScript      = 'main.nf'
     nextflowVersion = '!>=23.04.0'
-    version         = '2.5.2dev'
+    version         = '2.5.2'
     doi             = '10.1093/nargab/lqac007'
 }