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Updated gtdb_db version to r214
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CarsonJM committed Aug 7, 2023
1 parent f7ac3c8 commit e6a2c71
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Showing 2 changed files with 2 additions and 2 deletions.
2 changes: 1 addition & 1 deletion nextflow.config
Original file line number Diff line number Diff line change
Expand Up @@ -85,7 +85,7 @@ params {
cat_official_taxonomy = false
save_cat_db = false
skip_gtdbtk = false
gtdb_db = "https://data.ace.uq.edu.au/public/gtdb/data/releases/release202/202.0/auxillary_files/gtdbtk_r202_data.tar.gz"
gtdb_db = "https://data.ace.uq.edu.au/public/gtdb/data/releases/release214/214.1/auxillary_files/gtdbtk_r214_data.tar.gz"
gtdbtk_min_completeness = 50.0
gtdbtk_max_contamination = 10.0
gtdbtk_min_perc_aa = 10
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2 changes: 1 addition & 1 deletion nextflow_schema.json
Original file line number Diff line number Diff line change
Expand Up @@ -519,7 +519,7 @@
"gtdb_db": {
"type": "string",
"description": "Specify the location of a GTDBTK database. Can be either an uncompressed directory or a `.tar.gz` archive. If not specified will be downloaded for you when GTDBTK or binning QC is not skipped.",
"default": "https://data.ace.uq.edu.au/public/gtdb/data/releases/release202/202.0/auxillary_files/gtdbtk_r202_data.tar.gz"
"default": "https://data.ace.uq.edu.au/public/gtdb/data/releases/release214/214.1/auxillary_files/gtdbtk_r214_data.tar.gz"
},
"gtdbtk_min_completeness": {
"type": "number",
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