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Bump version for 2.5.2 reelase #567

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merged 2 commits into from
Feb 2, 2024
Merged

Bump version for 2.5.2 reelase #567

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08d197b
Update CHANGELOG and bump version for reelase
jfy133 Feb 2, 2024
409b7f8
Typo fix
jfy133 Feb 2, 2024
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18 changes: 10 additions & 8 deletions CHANGELOG.md
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The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## dev - [unreleased]
## 2.5.2 - [2024-02-02]

### `Added`

- [#548](https://github.com/nf-core/mag/pull/548) - Fixes to (reported by @maxibor, @PPpissar, @muniheart, @llborcard, fix by @maxibor)
- GTDBK-TK execution
- CAT/QUAST/DEPTH bin summary file name collisions
- BUSCO database parsing
- Correct CAT name files
- [#562](https://github.com/nf-core/mag/pull/562) - Add CAT summary into the global bin_summary (by @maxibor)
- [#565](https://github.com/nf-core/mag/pull/565) - Add warning of empty GTDB-TK results if no contigs pass completeness filter (fix by @jfy133 and @maxibor)
- [#565](https://github.com/nf-core/mag/pull/565) - Add warning of empty GTDB-TK results if no contigs pass completeness filter (by @jfy133 and @maxibor)

### `Changed`

- [#563](https://github.com/nf-core/mag/pull/562) Update to nf-core v2.12 `TEMPLATE` (by @CarsonJM)
- [#566](https://github.com/nf-core/mag/pull/566) - More logical ordering of MultiQC sections (assembly and bin sections go together respectively) (fix by @jfy133)

### `Fixed`

- [#548](https://github.com/nf-core/mag/pull/548) - Fixes to (reported by @maxibor, @PPpissar, @muniheart, @llborcard, fix by @maxibor)
- GTDBK-TK execution
- CAT/QUAST/DEPTH bin summary file name collisions
- BUSCO database parsing
- Correct CAT name files
- [#558](https://github.com/nf-core/mag/pull/558) - Fix bug in run merging when dealing with single end data (reported by @roberta-davidson, fix by @jfy133)
- [#566](https://github.com/nf-core/mag/pull/566) - More logical ordering of MultiQC sections (assembly and bin sections go together respectively) (fix by @jfy133)

### `Dependencies`

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4 changes: 2 additions & 2 deletions assets/multiqc_config.yml
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@@ -1,7 +1,7 @@
report_comment: >
This report has been generated by the <a href="https://github.com/nf-core/mag/tree/dev" target="_blank">nf-core/mag</a>
This report has been generated by the <a href="https://github.com/nf-core/mag/releases/tag/2.5.2" target="_blank">nf-core/mag</a>
analysis pipeline. For information about how to interpret these results, please see the
<a href="https://nf-co.re/mag/dev/docs/output" target="_blank">documentation</a>.
<a href="https://nf-co.re/mag/2.5.2/docs/output" target="_blank">documentation</a>.
report_section_order:
"nf-core-mag-methods-description":
order: -1000
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -379,7 +379,7 @@ manifest {
description = """Assembly, binning and annotation of metagenomes"""
mainScript = 'main.nf'
nextflowVersion = '!>=23.04.0'
version = '2.5.2dev'
version = '2.5.2'
doi = '10.1093/nargab/lqac007'
}

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