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Batch update of modules #15464

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Batch update of modules

Batch update of modules #15464

Run time

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Job Run time
prettier
29s
pre-commit
1m 24s
editorconfig
13s
nf-test-changes
26m 54s
pytest-changes
4s
nf-core-lint-modules (deepvariant)
55s
nf-core-lint-modules (bcl_demultiplex)
48s
nf-core-lint-modules (bam_create_som_pon_gatk)
46s
nf-core-lint-modules (fastq_taxonomic_profile_metaphlan)
44s
nf-core-lint-modules (bam_stats_mirna_mirtop)
45s
nf-core-lint-modules (bam_dedup_stats_samtools_umitools)
52s
nf-core-lint-modules (fastq_align_bowtie2)
56s
nf-core-lint-modules (fastq_align_star)
45s
nf-core-lint-modules (fastq_fastqc_umitools_trimgalore)
50s
nf-core-lint-modules (bam_variant_demix_boot_freyja)
44s
nf-core-lint-modules (fastq_align_dna)
49s
nf-core-lint-modules (fasta_explore_search_plot_tidk)
43s
nf-core-lint-modules (bam_markduplicates_picard)
47s
nf-core-lint-modules (bedgraph_bedclip_bedgraphtobigwig)
44s
nf-core-lint-modules (vcf_impute_glimpse)
48s
nf-core-lint-modules (bam_sort_stats_samtools)
44s
nf-core-lint-modules (fasta_build_add_kraken2)
54s
nf-core-lint-modules (fastq_align_bamcmp_bwa)
44s
nf-core-lint-modules (fasta_binning_concoct)
45s
nf-core-lint-modules (fastq_subsample_fq_salmon)
44s
nf-core-lint-modules (fastq_download_prefetch_fasterqdump_sratools)
46s
nf-core-lint-modules (fastq_align_mapad)
50s
nf-core-lint-modules (bam_subsampledepth_samtools)
48s
nf-core-lint-modules (fasta_newick_epang_gappa)
45s
nf-core-lint-modules (bam_stats_samtools)
52s
nf-core-lint-modules (fastq_extract_kraken_krakentools)
47s
nf-core-lint-modules (bam_qc_picard)
44s
nf-core-lint-modules (mmseqs_contig_taxonomy)
49s
nf-core-lint-modules (bam_tumor_normal_somatic_variant_calling_strelka)
55s
nf-core-lint-modules (bam_rseqc)
47s
nf-core-lint-modules (bam_dedup_stats_samtools_umicollapse)
46s
nf-core-lint-modules (fastq_align_hisat2)
44s
nf-core-lint-modules (fastq_fastqc_umitools_fastp)
56s
nf-core-lint-modules (fastq_align_bwa)
49s
nf-core-lint-modules (fasta_hmmsearch_rank_fastas)
43s
nf-core-lint-modules (fasta_build_add_kraken2_bracken)
42s
nf-core-lint-modules (quantify_pseudo_alignment)
49s
nf-core-lint-modules (fastq_qc_trim_filter_setstrandedness)
44s
confirm-pass
7s
59m 14s