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Swap bbmap/align to nf-test and add stub #4390

Swap bbmap/align to nf-test and add stub

Swap bbmap/align to nf-test and add stub #4390

Triggered via pull request January 9, 2025 09:21
@SPPearceSPPearce
synchronize #7278
bbmap_align
Status Cancelled
Total duration 13m 42s
Artifacts

nf-test.yml

on: pull_request
nf-test-changes
34s
nf-test-changes
Matrix: nf-test
confirm-pass
0s
confirm-pass
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15 errors and 2 warnings
Test | docker_self_hosted | 1
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
Test | docker_self_hosted | 1
The operation was canceled.
Test | singularity | 3
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
Test | conda | 4
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
Test | conda | 4
The operation was canceled.
Test | conda | 2
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
Test | conda | 2
The operation was canceled.
Test | singularity | 4
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
Test | singularity | 4
The operation was canceled.
Test | conda | 3
The self-hosted runner: ubuntu-2204-x64_i-093659813996fb56a lost communication with the server. Verify the machine is running and has a healthy network connection. Anything in your workflow that terminates the runner process, starves it for CPU/Memory, or blocks its network access can cause this error.
Test | docker_self_hosted | 4
The self-hosted runner: ubuntu-2204-x64_i-064c6ef6486e1bee9 lost communication with the server. Verify the machine is running and has a healthy network connection. Anything in your workflow that terminates the runner process, starves it for CPU/Memory, or blocks its network access can cause this error.
Test | singularity | 1
The self-hosted runner: ubuntu-2204-x64_i-0068dc8214023fe3d lost communication with the server. Verify the machine is running and has a healthy network connection. Anything in your workflow that terminates the runner process, starves it for CPU/Memory, or blocks its network access can cause this error.
Test | conda | 1
The self-hosted runner: ubuntu-2204-x64_i-0c167ab74515b9a24 lost communication with the server. Verify the machine is running and has a healthy network connection. Anything in your workflow that terminates the runner process, starves it for CPU/Memory, or blocks its network access can cause this error.
Test | docker_self_hosted | 3
The self-hosted runner: ubuntu-2204-x64_i-03061a4474e7d5ace lost communication with the server. Verify the machine is running and has a healthy network connection. Anything in your workflow that terminates the runner process, starves it for CPU/Memory, or blocks its network access can cause this error.
confirm-pass
Process completed with exit code 1.
nf-test-changes
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
confirm-pass
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636