Update gecco/run (#3652)

Version bump to 0.9.8
nf-core · Jul 19, 2023 · 8c029dd · 8c029dd
1 parent dd3ed02
commit 8c029dd
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Showing 2 changed files with 7 additions and 7 deletions.
diff --git a/modules/nf-core/gecco/run/main.nf b/modules/nf-core/gecco/run/main.nf
@@ -2,10 +2,10 @@ process GECCO_RUN {
     tag "$meta.id"
     label 'process_low'
 
-    conda "bioconda::gecco=0.9.2"
+    conda "bioconda::gecco=0.9.8"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'https://depot.galaxyproject.org/singularity/gecco:0.9.2--pyhdfd78af_0':
-        'biocontainers/gecco:0.9.2--pyhdfd78af_0' }"
+        'https://depot.galaxyproject.org/singularity/gecco:0.9.8--pyhdfd78af_0':
+        'biocontainers/gecco:0.9.8--pyhdfd78af_0' }"
 
     input:
     tuple val(meta), path(input), path(hmm)

diff --git a/tests/modules/nf-core/gecco/run/test.yml b/tests/modules/nf-core/gecco/run/test.yml
@@ -1,13 +1,13 @@
 - name: gecco run test_gecco_run
-  command: nextflow run ./tests/modules/nf-core/gecco/run -entry test_gecco_run -c ./tests/config/nextflow.config  -c ./tests/modules/nf-core/gecco/run/nextflow.config
+  command: nextflow run ./tests/modules/nf-core/gecco/run -entry test_gecco_run -c ./tests/config/nextflow.config -c ./tests/modules/nf-core/gecco/run/nextflow.config
   tags:
     - gecco/run
     - gecco
   files:
     - path: output/gecco/NC_018507.1_cluster_1.gbk
     - path: output/gecco/genome.clusters.tsv
-      md5sum: 6560ec765f6bbae50645896fd93b35cd
+      md5sum: 84a10da0afff6e2085d8296db69eb8b0
     - path: output/gecco/genome.features.tsv
-      md5sum: 07492cf186003311ba9829056c65787f
+      md5sum: dcd929c60337b4835729d886897cdd36
     - path: output/gecco/genome.genes.tsv
-      md5sum: 031a37dc603f8a5296f462608fd7bcc3
+      md5sum: 2338b99d9b77200e9a071941ad8bb3ac