added stub section and updated test #7257
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gitpod prove for docker test: |
SPPearce
approved these changes
Jan 7, 2025
| @@ -35,4 +35,17 @@ process BCFTOOLS_CONSENSUS { | |||
| bcftools: \$(bcftools --version 2>&1 | head -n1 | sed 's/^.*bcftools //; s/ .*\$//') | |||
| END_VERSIONS | |||
| """ | |||
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| stub: | |||
| def args = task.ext.args ?: '' | |||
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| def args = task.ext.args ?: '' |
| stub: | ||
| def args = task.ext.args ?: '' | ||
| def prefix = task.ext.prefix ?: "${meta.id}" | ||
| def masking = mask ? "-m $mask" : "" |
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| def masking = mask ? "-m $mask" : "" |
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Description
This PR adds a stub section to the module (which is somehow missing from #6219) and updates the test snapshot.
PR checklist
nf-core modules test <MODULE> --profile dockernf-core modules test <MODULE> --profile singularitynf-core modules test <MODULE> --profile conda