Skip to content

Issues: nf-core/phageannotator

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

47 Open 23 Closed
47 Open 23 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Add prophage tracer to predict prophage activity
#113 opened Apr 18, 2024 by CarsonJM
Replace mash screen with sylph
#112 opened Apr 18, 2024 by CarsonJM
Replace BLAST with skani for ani clustering
#111 opened Apr 18, 2024 by CarsonJM
Add clustering with Inphared to assign ICTV taxonomy
#105 opened Mar 20, 2024 by CarsonJM
Add viralFlye to nf-core phageannotator
#104 opened Mar 18, 2024 by lborcard
Prepare phageannotator for first release
#103 opened Mar 16, 2024 by CarsonJM
Update nf-core/phageannotator nf-test structure to match fetchngs
#94 opened Feb 19, 2024 by CarsonJM
@CarsonJM
Update nf-tests so full modules are only run in module tests
#93 opened Feb 15, 2024 by CarsonJM
1
Add ability to start nf-core/phageannotator with fastq only, fasta only, or a combination of both enhancement New feature or request
#90 opened Feb 6, 2024 by CarsonJM
@CarsonJM
Add phanta to nf-core/phageannotator
#87 opened Jan 22, 2024 by CarsonJM
Add vRhyme to nf-core/phageannotator
#85 opened Jan 18, 2024 by CarsonJM
Add genus/family-level clustering to nf-core/phageannotator
#84 opened Jan 11, 2024 by CarsonJM
Update nf-core/phageannotator local modules/subworkflows
#83 opened Jan 2, 2024 by CarsonJM
@CarsonJM
Auto generate nf-core/differentialabundance samplesheet using nf-core/phageannotator
#76 opened Dec 15, 2023 by CarsonJM
Auto generate nf-core/funscan samplesheet using nf-core/phageannotator
#75 opened Dec 15, 2023 by CarsonJM
Auto generate nf-core/mag samplesheet using nf-core/taxprofiler
#74 opened Dec 15, 2023 by CarsonJM
Auto generate nf-core/mag samplesheet using nf-core/fetchngs
#73 opened Dec 15, 2023 by CarsonJM
Add phanta to nf-core/taxprofiler
#72 opened Dec 15, 2023 by CarsonJM
Add phanta to nf-core/modules
#71 opened Dec 15, 2023 by CarsonJM
Add phanta to nf-core/taxprofiler
#70 opened Dec 15, 2023 by CarsonJM
Add VirSorter2 to nf-core/phageannotator
#69 opened Dec 15, 2023 by CarsonJM
Add VirSorter2 to nf-core/modules
#68 opened Dec 15, 2023 by CarsonJM
Add other phage identification options to nf-core/phageannotator
#67 opened Dec 15, 2023 by CarsonJM
Add ViromeQC to nf-core/phageannotator
#66 opened Dec 15, 2023 by CarsonJM
Add ViromeQC to nf-core/modules
#65 opened Dec 15, 2023 by CarsonJM
ProTip! no:milestone will show everything without a milestone.