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review suggestions release prep v1.1.0 #382

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review suggestions release prep v1.1.0 #382

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39 changes: 0 additions & 39 deletions conf/public_aws_ecr.config
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8 changes: 0 additions & 8 deletions nextflow.config
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Original file line number Diff line number Diff line change
Expand Up @@ -193,9 +193,6 @@ profiles {
executor.cpus = 16
executor.memory = 60.GB
}
public_aws_ecr {
includeConfig 'conf/public_aws_ecr.config'
}
test { includeConfig 'conf/test.config' }
test_full { includeConfig 'conf/test_full.config' }
test_one_sample { includeConfig 'conf/test_one_sample.config' }
Expand Down Expand Up @@ -249,11 +246,6 @@ env {
// Capture exit codes from upstream processes when piping
process.shell = ['/bin/bash', '-euo', 'pipefail']

// Set default registry for Docker and Podman independent of -profile
// Will not be used unless Docker / Podman are enabled
// Set to your registry if you have a mirror of containers
docker.registry = 'quay.io'
podman.registry = 'quay.io'

def trace_timestamp = new java.util.Date().format( 'yyyy-MM-dd_HH-mm-ss')
timeline {
Expand Down