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We are looking into expanding the documentation by adding tutorials for different usages. For this we would love some community feedback:
What are some questions you asked yourself when starting out? What would you like to see explained in more detail? Where do you find the documentation is lacking?
The text was updated successfully, but these errors were encountered:
How to use sarek when library was done using UMIs. Starting at different steps (a) UMIs already present in the fastq header, but not in sequence, b) original bcls, etc
How to provide different parameters for certain tools
As far as I know, --intervals would need to be either a 3 column bed, or a 5 column bed with estimated seconds in the score column. Anything else will/can result in failures (at least with gatk). Would be nice to make this more explicit.
Description of feature
We are looking into expanding the documentation by adding tutorials for different usages. For this we would love some community feedback:
What are some questions you asked yourself when starting out? What would you like to see explained in more detail? Where do you find the documentation is lacking?
The text was updated successfully, but these errors were encountered: