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Updated data folder to include unredacted UK RWE data in the model in…
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…put Excel front end and survival analysis RDS. Updated instructions to account for this. Updated code to reference the new files as default
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DawnLeeHE committed Jul 30, 2024
1 parent a141dd0 commit 56b9813
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4 changes: 2 additions & 2 deletions 2_Scripts/Model_Structure.R
Original file line number Diff line number Diff line change
Expand Up @@ -266,7 +266,7 @@ User_types <- c("Submitting company", "NICE", "EAG", "Committee", "NHSE", "Clini
# The first part of this code pulls all of the named ranges from the excel workbook, expand the parameters table

#Option to define Excel path on local machine - comment in this and comment out the code below to select file
excel_path <- "./1_Data/ID6186_RCC_model inputs FAD version [ACIC cPAS redacted and CIC redacted].xlsm"
excel_path <- "./1_Data/ID6184_RCC_model inputs FAD version [UK RWE unredacted, ACIC redacted, cPAS redacted].xlsm"
#i <- f_excel_extract(excel_path, verbose = TRUE)

if (file.exists(excel_path)) {
Expand Down Expand Up @@ -778,7 +778,7 @@ if (i$dd_run_surv_reg == "Yes") {

# option to load from pre-specified file path on local machine, uncomment this and comment out the line below to use

RDS_path <- "./1_Data/Survival_analysis_noTTDorTTPorPPS[NoACIC].rds"
RDS_path <- "./1_Data/survival_analysis_no_ipd_CompanyTTDTTPPPS_redacted.rds"
if (file.exists(RDS_path)) {
i$surv$reg <- readRDS(RDS_path)
} else {
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