Clean commit - added metadatat files to clean MAIN #27
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| self.connect() | ||
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| def connect(self) -> str: | ||
| """ Not needed as metadata services are REST service calls """ |
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[blackfmt] reported by reviewdog 🐶
Suggested change
| """ Not needed as metadata services are REST service calls """ | |
| """Not needed as metadata services are REST service calls""" |
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| ##################################################################### | ||
| # Supporting Functions |
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Suggested change
| ##################################################################### | |
| # Supporting Functions | |
| ##################################################################### | |
| # Supporting Functions |
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| ##################################################################### | ||
| # Function to GET content from URL with retries |
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Suggested change
| ##################################################################### | |
| # Function to GET content from URL with retries | |
| ##################################################################### | |
| # Function to GET content from URL with retries |
| ##################################################################### | ||
| # Function to GET content from URL with retries | ||
| def getURL(self, url, headers="NONE"): | ||
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| retries = Retry(total=6, | ||
| backoff_factor=1, | ||
| status_forcelist=[403, 404, 413, 429, 500, 502, 503, 504]) |
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Suggested change
| retries = Retry(total=6, | |
| backoff_factor=1, | |
| status_forcelist=[403, 404, 413, 429, 500, 502, 503, 504]) | |
| retries = Retry( | |
| total=6, backoff_factor=1, status_forcelist=[403, 404, 413, 429, 500, 502, 503, 504] | |
| ) |
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| def list_datasets( | ||
| self, | ||
| limit: int = 10, | ||
| offset: int = 0 | ||
| ) -> list: |
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[blackfmt] reported by reviewdog 🐶
Suggested change
| def list_datasets( | |
| self, | |
| limit: int = 10, | |
| offset: int = 0 | |
| ) -> list: | |
| def list_datasets(self, limit: int = 10, offset: int = 0) -> list: |
| """ | ||
| self.host_api = "https://scicrunch.org/api/1/elastic/SPARC_Algolia_pr/_search" | ||
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| list_url = self.host_api + "?" + "from=" + str(offset) + "&size=" + str(limit) + "&key=" + self.scicrunch_api_key |
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Suggested change
| list_url = self.host_api + "?" + "from=" + str(offset) + "&size=" + str(limit) + "&key=" + self.scicrunch_api_key | |
| list_url = ( | |
| self.host_api | |
| + "?" | |
| + "from=" | |
| + str(offset) | |
| + "&size=" | |
| + str(limit) | |
| + "&key=" | |
| + self.scicrunch_api_key | |
| ) |
| list_results = self.getURL(list_url, headers=self.default_headers) | ||
| return list_results | ||
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Suggested change
| def search_datasets(self, query: str = '{"query": { "match_all": {}}}') -> list: | |
| """Gets datasets matching specified query. | |
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| def search_datasets( | ||
| self, | ||
| query: str = "{\"query\": { \"match_all\": {}}}" | ||
| ) -> list: | ||
| """Gets datasets matching specified query. | ||
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| This function provides |
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[blackfmt] reported by reviewdog 🐶
Suggested change
| def search_datasets( | |
| self, | |
| query: str = "{\"query\": { \"match_all\": {}}}" | |
| ) -> list: | |
| """Gets datasets matching specified query. | |
| This function provides | |
| This function provides |
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| list_url = self.host_api + "?" + "key=" + self.scicrunch_api_key | ||
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| list_results = self.postURL(list_url, body = query, headers=self.default_headers) |
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Suggested change
| list_results = self.postURL(list_url, body = query, headers=self.default_headers) | |
| list_results = self.postURL(list_url, body=query, headers=self.default_headers) |
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| # Instructions for getting an API key can be found at: https://fdilab.gitbook.io/api-handbook/sparc-k-core-api-overview/getting-started-with-sparc-apis | ||
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| import json | ||
| from sparc.client import SparcClient |
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[formatters] reported by reviewdog 🐶
Suggested change
| from sparc.client import SparcClient | |
| from sparc.client import SparcClient |
| @@ -0,0 +1,281 @@ | |||
| import logging | |||
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Suggested change
| import logging |
| @@ -0,0 +1,281 @@ | |||
| import logging | |||
| import json | |||
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Suggested change
| import logging | |
| from configparser import SectionProxy | |
| from typing import List, Optional, Union | |
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| from configparser import SectionProxy | ||
| from typing import List, Optional, Union |
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[formatters] reported by reviewdog 🐶
Suggested change
| from configparser import SectionProxy | |
| from typing import List, Optional, Union |
| self.connect() | ||
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| def connect(self) -> str: | ||
| """ Not needed as metadata services are REST service calls """ |
There was a problem hiding this comment.
[formatters] reported by reviewdog 🐶
Suggested change
| """ Not needed as metadata services are REST service calls """ | |
| """Not needed as metadata services are REST service calls""" |
Comment on lines
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to
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| def list_datasets( | ||
| self, | ||
| limit: int = 10, | ||
| offset: int = 0 | ||
| ) -> list: |
There was a problem hiding this comment.
[formatters] reported by reviewdog 🐶
Suggested change
| def list_datasets( | |
| self, | |
| limit: int = 10, | |
| offset: int = 0 | |
| ) -> list: | |
| def list_datasets(self, limit: int = 10, offset: int = 0) -> list: |
| """ | ||
| self.host_api = "https://scicrunch.org/api/1/elastic/SPARC_Algolia_pr/_search" | ||
|
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| list_url = self.host_api + "?" + "from=" + str(offset) + "&size=" + str(limit) + "&key=" + self.scicrunch_api_key |
There was a problem hiding this comment.
[formatters] reported by reviewdog 🐶
Suggested change
| list_url = self.host_api + "?" + "from=" + str(offset) + "&size=" + str(limit) + "&key=" + self.scicrunch_api_key | |
| list_url = ( | |
| self.host_api | |
| + "?" | |
| + "from=" | |
| + str(offset) | |
| + "&size=" | |
| + str(limit) | |
| + "&key=" | |
| + self.scicrunch_api_key | |
| ) |
| list_results = self.getURL(list_url, headers=self.default_headers) | ||
| return list_results | ||
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|
|
There was a problem hiding this comment.
[formatters] reported by reviewdog 🐶
Suggested change
| def search_datasets(self, query: str = '{"query": { "match_all": {}}}') -> list: | |
| """Gets datasets matching specified query. | |
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+257
to
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| def search_datasets( | ||
| self, | ||
| query: str = "{\"query\": { \"match_all\": {}}}" | ||
| ) -> list: | ||
| """Gets datasets matching specified query. | ||
|
|
||
| This function provides |
There was a problem hiding this comment.
[formatters] reported by reviewdog 🐶
Suggested change
| def search_datasets( | |
| self, | |
| query: str = "{\"query\": { \"match_all\": {}}}" | |
| ) -> list: | |
| """Gets datasets matching specified query. | |
| This function provides | |
| This function provides |
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| list_url = self.host_api + "?" + "key=" + self.scicrunch_api_key | ||
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| list_results = self.postURL(list_url, body = query, headers=self.default_headers) |
There was a problem hiding this comment.
[formatters] reported by reviewdog 🐶
Suggested change
| list_results = self.postURL(list_url, body = query, headers=self.default_headers) | |
| list_results = self.postURL(list_url, body=query, headers=self.default_headers) |
|
@athril The CI build is failing on a file we haven't touched and is not part of this pull request. |
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New pull request with clean addition to latest MAIN