fix test no backend #246
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| # This workflow will install Python dependencies, run tests and lint with a single version of Python | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Python application | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| env: | |
| ODA_ONTOLOGY_PATH: tests/oda-ontology.ttl | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.9 | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.9 | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install flake8 pytest mypy pylint coverage wheel | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| if [ -f test-requirements.txt ]; then pip install -r test-requirements.txt; fi | |
| pip install -e .[test] | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics || echo "failed lint" | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics || echo "failed second lint" | |
| - name: PyLint - more lint | |
| run: | | |
| pylint -E dispatcher_plugin_nb2workflow || echo 'this is fine!' | |
| - name: MyPy | |
| run: | | |
| mypy dispatcher_plugin_nb2workflow --ignore-missing-imports || echo 'this is fine too!' | |
| - name: Test with pytest | |
| run: | | |
| curl -o $ODA_ONTOLOGY_PATH https://raw.githubusercontent.com/oda-hub/ontology/ecdf2a61f87aac13ae7a96c0f3dad960312adae4/ontology.ttl | |
| python -m coverage run --source=dispatcher_plugin_nb2workflow -m pytest tests -m "not fullstack" -sv --full-trace --log-cli-level=DEBUG | |
| - name: Test full stack | |
| run: | | |
| python -m coverage run --source=dispatcher_plugin_nb2workflow -m pytest tests -m "fullstack" -sv --full-trace --log-cli-level=DEBUG |