Add action to CI that runs certain tests with pandas 1

optimagic-dev · Mar 4, 2024 · 4c17eca · 4c17eca
1 parent 07a8dd7
commit 4c17eca
Show file tree

Hide file tree

Showing 2 changed files with 63 additions and 0 deletions.
diff --git a/.envs/testenv-pandas.yml b/.envs/testenv-pandas.yml
@@ -0,0 +1,32 @@
+---
+name: estimagic
+channels:
+  - conda-forge
+  - nodefaults
+dependencies:
+  - jax
+  - pygmo
+  - nlopt  # dev, tests
+  - pip  # dev, tests, docs
+  - pytest  # dev, tests
+  - pytest-cov  # tests
+  - pytest-xdist  # dev, tests
+  - statsmodels  # dev, tests
+  - bokeh<=2.4.3  # run, tests
+  - click  # run, tests
+  - cloudpickle  # run, tests
+  - joblib  # run, tests
+  - numpy>=1.17.0  # run, tests
+  - pandas<2.0.0  # run, tests
+  - plotly  # run, tests
+  - pybaum >= 0.1.2  # run, tests
+  - scipy>=1.2.1  # run, tests
+  - sqlalchemy  # run, tests
+  - tranquilo>=0.0.4  # dev, tests
+  - pip:  # dev, tests, docs
+      - DFO-LS  # dev, tests
+      - Py-BOBYQA  # dev, tests
+      - fides==0.7.4  # dev, tests
+      - kaleido  # dev, tests
+      - simoptlib==1.0.1  # dev, tests
+      - -e ../
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
@@ -72,6 +72,37 @@ jobs:
         run: |
           micromamba activate estimagic
           pytest -m "not slow and not jax"
+  run-tests-with-old-pandas:
+    name: Run tests for ${{ matrix.os}} on ${{ matrix.python-version }} with pandas 1
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: false
+      matrix:
+        os:
+          - ubuntu-latest
+          - macos-latest
+          - windows-latest
+        python-version:
+          - '3.9'
+          - '3.10'
+          - '3.11'
+    steps:
+      - uses: actions/checkout@v3
+      - name: create build environment
+        uses: mamba-org/provision-with-micromamba@main
+        with:
+          environment-file: ./.envs/testenv-pandas.yml
+          environment-name: estimagic
+          cache-env: true
+          extra-specs: |
+            python=${{ matrix.python-version }}
+      - name: run pytest
+        shell: bash -l {0}
+        run: |
+          micromamba activate estimagic
+          pytest tests/visualization
+          pytest tests/parameters
+          pytest tests/inference
   code-in-docs:
     name: Run code snippets in documentation
     runs-on: ubuntu-latest