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Fix checks.yml
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@gen740
gen740 committed Mar 11, 2024
1 parent 3930c89 commit 65a9bbe
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Showing 2 changed files with 279 additions and 27 deletions.
290 changes: 279 additions & 11 deletions .github/workflows/checks.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -33,28 +33,296 @@ jobs:
python -m pip install -U pip
pip install --progress-bar off -U .[checking]
pip install --progress-bar off -U .[test]
pip install --progress-bar off -U .[all]
- name: Output installed packages
- uses: dorny/paths-filter@v3
id: changes
with:
filters: |
allennlp:
- 'optuna_integration/allennlp/**'
- 'tests/allennlp/**'
- '.github/workflows/checks.yml'
botorch:
- 'optuna_integration/botorch/**'
- 'tests/botorch/**'
- '.github/workflows/checks.yml'
catalyst:
- 'optuna_integration/catalyst/**'
- 'tests/catalyst/**'
- '.github/workflows/checks.yml'
catboost:
- 'optuna_integration/catboost/**'
- 'tests/catboost/**'
- '.github/workflows/checks.yml'
chainer:
- 'optuna_integration/chainer/**'
- 'tests/chainer/**'
- '.github/workflows/checks.yml'
chainermn:
- 'optuna_integration/chainermn/**'
- 'tests/chainermn/**'
- '.github/workflows/checks.yml'
cma:
- 'optuna_integration/cma/**'
- 'tests/cma/**'
- '.github/workflows/checks.yml'
dask:
- 'optuna_integration/dask/**'
- 'tests/dask/**'
- '.github/workflows/checks.yml'
fastaiv1:
- 'optuna_integration/fastaiv1/**'
- 'tests/fastaiv1/**'
- '.github/workflows/checks.yml'
fastaiv2:
- 'optuna_integration/fastaiv2/**'
- 'tests/fastaiv2/**'
- '.github/workflows/checks.yml'
keras:
- 'optuna_integration/keras/**'
- 'tests/keras/**'
- '.github/workflows/checks.yml'
lightgbm:
- 'optuna_integration/lightgbm/**'
- 'tests/lightgbm/**'
- '.github/workflows/checks.yml'
mlflow:
- 'optuna_integration/mlflow/**'
- 'tests/mlflow/**'
- '.github/workflows/checks.yml'
mxnet:
- 'optuna_integration/mxnet/**'
- 'tests/mxnet/**'
- '.github/workflows/checks.yml'
pytorch_distributed:
- 'optuna_integration/pytorch_distributed/**'
- 'tests/pytorch_distributed/**'
- '.github/workflows/checks.yml'
pytorch_ignite:
- 'optuna_integration/pytorch_ignite/**'
- 'tests/pytorch_ignite/**'
- '.github/workflows/checks.yml'
pytorch_lightning:
- 'optuna_integration/pytorch_lightning/**'
- 'tests/pytorch_lightning/**'
- '.github/workflows/checks.yml'
shap:
- 'optuna_integration/shap/**'
- 'tests/shap/**'
- '.github/workflows/checks.yml'
sklearn:
- 'optuna_integration/sklearn/**'
- 'tests/sklearn/**'
- '.github/workflows/checks.yml'
skopt:
- 'optuna_integration/skopt/**'
- 'tests/skopt/**'
- '.github/workflows/checks.yml'
skorch:
- 'optuna_integration/skorch/**'
- 'tests/skorch/**'
- '.github/workflows/checks.yml'
tensorboard:
- 'optuna_integration/tensorboard/**'
- 'tests/tensorboard/**'
- '.github/workflows/checks.yml'
tensorflow:
- 'optuna_integration/tensorflow/**'
- 'tests/tensorflow/**'
- '.github/workflows/checks.yml'
tfkeras:
- 'optuna_integration/tfkeras/**'
- 'tests/tfkeras/**'
- '.github/workflows/checks.yml'
wandb:
- 'optuna_integration/wandb/**'
- 'tests/wandb/**'
- '.github/workflows/checks.yml'
xgboost:
- 'optuna_integration/xgboost/**'
- 'tests/xgboost/**'
- '.github/workflows/checks.yml'
- name: detect allennlp
if: steps.changes.outputs.allennlp == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=allennlp ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect botorch
if: steps.changes.outputs.botorch == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=botorch ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect catalyst
if: steps.changes.outputs.catalyst == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=catalyst ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect catboost
if: steps.changes.outputs.catboost == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=catboost ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect chainer
if: steps.changes.outputs.chainer == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=chainer ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect chainermn
if: steps.changes.outputs.chainermn == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=chainermn ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect cma
if: steps.changes.outputs.cma == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=cma ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect dask
if: steps.changes.outputs.dask == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=dask ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect fastaiv1
if: steps.changes.outputs.fastaiv1 == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=fastaiv1 ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect fastaiv2
if: steps.changes.outputs.fastaiv2 == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=fastaiv2 ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect keras
if: steps.changes.outputs.keras == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=keras ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect lightgbm
if: steps.changes.outputs.lightgbm == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=lightgbm ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect mlflow
if: steps.changes.outputs.mlflow == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=mlflow ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect mxnet
if: steps.changes.outputs.mxnet == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=mxnet ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect pytorch_distributed
if: steps.changes.outputs.pytorch_distributed == 'true'
run: |
pip freeze --all
echo 'CHANGED_INTEGRATIONS=pytorch_distributed ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: Output dependency tree
- name: detect pytorch_ignite
if: steps.changes.outputs.pytorch_ignite == 'true'
run: |
pip install pipdeptree
pipdeptree
echo 'CHANGED_INTEGRATIONS=pytorch_ignite ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect pytorch_lightning
if: steps.changes.outputs.pytorch_lightning == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=pytorch_lightning ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect shap
if: steps.changes.outputs.shap == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=shap ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect sklearn
if: steps.changes.outputs.sklearn == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=sklearn ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect skopt
if: steps.changes.outputs.skopt == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=skopt ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect skorch
if: steps.changes.outputs.skorch == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=skorch ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect tensorboard
if: steps.changes.outputs.tensorboard == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=tensorboard ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect tensorflow
if: steps.changes.outputs.tensorflow == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=tensorflow ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect tfkeras
if: steps.changes.outputs.tfkeras == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=tfkeras ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect wandb
if: steps.changes.outputs.wandb == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=wandb ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: detect xgboost
if: steps.changes.outputs.xgboost == 'true'
run: |
echo 'CHANGED_INTEGRATIONS=xgboost ${{ env.CHANGED_INTEGRATIONS }}' >> $GITHUB_ENV
- name: echo changed
run: |
for i in $CHANGED_INTEGRATIONS
do
echo $i
done
- name: Install dependencies
run: |
for i in $CHANGED_INTEGRATIONS
do
pip install -r optuna_integration/${i}/requirements.txt
done
- name: black
run: black . --check --diff
run: |
for i in $CHANGED_INTEGRATIONS
do
[ -e optuna_integration/${i} ] && black optuna_integration/${i} --check --diff
[ -e tests/${i} ] && black tests/${i} --check --diff
done
- name: flake8
run: flake8 .
run: |
for i in $CHANGED_INTEGRATIONS
do
[ -e optuna_integration/${i} ] && flake8 optuna_integration/${i}
[ -e tests/${i} ] && flake8 tests/${i}
done
- name: isort
run: isort . --check --diff
run: |
for i in $CHANGED_INTEGRATIONS
do
[ -e optuna_integration/${i} ] && isort optuna_integration/${i} --check --diff
[ -e tests/${i} ] && isort tests/${i} --check --diff
done
- name: mypy
run: mypy .
run: |
for i in $CHANGED_INTEGRATIONS
do
[ -e optuna_integration/${i} ] && mypy optuna_integration/${i}
[ -e tests/${i} ] && mypy tests/${i}
done
- name: blackdoc
run: blackdoc . --check --diff
run: |
for i in $CHANGED_INTEGRATIONS
do
[ -e optuna_integration/${i} ] && blackdoc optuna_integration/${i} --check --diff
[ -e tests/${i} ] && blackdoc tests/${i} --check --diff
done
16 changes: 0 additions & 16 deletions pyproject.toml
View file
Original file line number Diff line number Diff line change
Expand Up @@ -55,22 +55,6 @@ document = [
"sphinx",
"sphinx_rtd_theme",
]
all = [
"gpytorch",
"lightning",
"pandas",
"pytorch-ignite",
"scikit-learn>=0.24.2",
"scikit-optimize",
"scipy>=1.9.2; python_version>='3.8'",
"shap",
"skorch",
"tensorboard",
"tensorflow",
"torch",
"wandb",
"xgboost",
]

[tool.setuptools.packages.find]
# where = ["."]
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