BioComputing Group, University of Padova

All

31 repositories

dome-registry
Public
TypeScript
•0•0•0•0•Updated Nov 14, 2024Nov 14, 2024
ped5-ui
Public
HTML
•0•0•2•0•Updated Oct 14, 2024Oct 14, 2024
ngx-mol-viewers
Public
Angular wrapper for Mol* structure viewer, made simple
TypeScript
•
MIT License
•0•1•4•0•Updated Oct 3, 2024Oct 3, 2024
elastic-slurm-in-openstack
Public
Configure an elastic Slurm cluster on OpenStack cloud
Shell
•0•0•0•0•Updated Oct 3, 2024Oct 3, 2024
MobiDB-lite
Public
Long disorder consensus predictor
C
•
GNU General Public License v2.0
•0•10•2•0•Updated Sep 10, 2024Sep 10, 2024
FLIPPER
Public
Fast Linear Interacting Peptides Predictor
Python
•1•3•2•0•Updated Aug 30, 2024Aug 30, 2024
STRPsearch
Public
Python
•
GNU General Public License v3.0
•0•4•3•0•Updated Aug 26, 2024Aug 26, 2024
BioComputingUP.github.io
Public
SCSS
•
Creative Commons Attribution 4.0 International
•0•0•0•2•Updated Aug 1, 2024Aug 1, 2024
caid2-reference
Public
Jupyter Notebook
•0•0•0•0•Updated May 21, 2024May 21, 2024
CAFA-evaluator
Public
A Python Tool for Benchmarking Ontological Classification Methods
Python
•
GNU General Public License v3.0
•15•35•0•1•Updated May 18, 2024May 18, 2024
IDPregistry-UI
Public
TypeScript
•0•0•1•0•Updated May 5, 2024May 5, 2024
ring-pymol
Public
This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua
plugin bioinformatics pymol
Python
•
Other
•5•23•2•0•Updated Jan 29, 2024Jan 29, 2024
DRMAAtic-lib
Public
Python
•0•0•0•0•Updated Dec 20, 2023Dec 20, 2023
IDP-KG
Public
Scripts and notebooks for generating and analysing the IDP-KG.
Jupyter Notebook
•
Apache License 2.0
•2•0•5•0•Updated Oct 24, 2023Oct 24, 2023
IDPregistry-KG
Public
Shell
•0•0•0•0•Updated Oct 23, 2023Oct 23, 2023
apicuron-issue-tracker
Public
This repository is dedicated to issue tracking for APICURON, a recognition tool for scientific databases
typescript recognition web user-interface biocuration
0•0•2•0•Updated Sep 15, 2023Sep 15, 2023
AlphaFold-disorder
Public
Predict disorder and disorder binding from AlphaFold structures
Python
•
GNU General Public License v3.0
•4•14•0•0•Updated May 11, 2023May 11, 2023
mocafe
Public
mocafe: modeling cancer with FEniCS
Python
•1•4•0•0•Updated Feb 28, 2023Feb 28, 2023
FeatureViewerTypeScript
Public
Library to visualize protein sequence features in Typescript using D3. This repository is based on calipho-sib/feature-viewer.
TypeScript
•
Other
•9•22•4•6•Updated Feb 4, 2023Feb 4, 2023
CAID
Public
Critical Assessment of Intrinsic Disorder
Python
•1•13•0•0•Updated Nov 28, 2022Nov 28, 2022
ProSeqViewer
Public
Visualize sequence and multiple sequence alignment (MSA)
bioinformatics javascript typescript sequence-viewer
TypeScript
•
GNU General Public License v2.0
•2•14•2•0•Updated May 30, 2022May 30, 2022
FeatureViewerTypeScript-documentation
Public
TypeScript
•0•0•0•0•Updated Apr 4, 2022Apr 4, 2022
MobiDB-lite_docker
Public
Jupyter Notebook
•
GNU General Public License v3.0
•4•0•0•0•Updated Mar 30, 2022Mar 30, 2022
ProSeqViewer-documentation
Public
Reference documentation of ProSeqViewer
TypeScript
•0•0•0•0•Updated Mar 22, 2022Mar 22, 2022
biological_data
Public
Biological Data - Data Science - University of Padova
Jupyter Notebook
•
GNU Affero General Public License v3.0
•1•0•0•0•Updated Dec 13, 2021Dec 13, 2021
feature-viewer-typescript-mobidb
Public
TypeScript
•
Other
•0•0•0•0•Updated Dec 2, 2021Dec 2, 2021
Cholesterol-model
Public
R
•1•1•0•0•Updated Feb 12, 2020Feb 12, 2020
CAGI-PCM1-assessment
Public
R
•0•0•0•0•Updated Feb 19, 2019Feb 19, 2019
CAGI-ID-assessment
Public
Assessment scripts for ID challenge of CAGI 5
R
•0•0•0•0•Updated Feb 14, 2019Feb 14, 2019
CAGI-p16-assessment
Public
https://genomeinterpretation.org/content/predict-how-variants-p16-tumor-suppressor-protein-affect-cell-proliferation
R
•0•0•0•0•Updated Apr 14, 2017Apr 14, 2017