Repositories list

• simpLAI

  Public
  Local ancestry inference from small reference panels

  C++

  •0•2•0•0•Updated Apr 23, 2024Apr 23, 2024

• signet

  Public
  An R package to detect selection in biological pathways

  rgraphnetwork+ 1simulated-annealing

  R

  •6•14•1•0•Updated Jan 19, 2024Jan 19, 2024

• polysel

  Public
  Pipeline to detect polygenic selection in gene sets

  HTML

  •

  BSD 2-Clause "Simplified" License

  •4•5•0•0•Updated Nov 23, 2023Nov 23, 2023

• sfspool

  Public
  Smarty

  •0•1•0•0•Updated Sep 14, 2023Sep 14, 2023

• genomicSurfing

  Public
  Scripts to simulate and analyse genomic diversity evolution during a range expansion

  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Nov 22, 2022Nov 22, 2022

• originsEarlyFarmers

  Public
  Code for Marchi et al. paper

  Shell

  •

  GNU General Public License v3.0

  •2•2•0•0•Updated Apr 28, 2022Apr 28, 2022

• vole_genome_analysis

  Public
  Material for the analysis of Microtus whole genomes

  R

  •2•2•0•0•Updated Apr 20, 2021Apr 20, 2021

• fsc_shiny

  Public
  Shiny application to facilitate the interpretation of fastsimcoal results.

  R

  •1•1•0•0•Updated Apr 11, 2021Apr 11, 2021

• ExpansionLoad_Bacteria

  Public
  0•0•0•0•Updated Aug 15, 2017Aug 15, 2017

• pathways

  Public
  0•2•0•0•Updated Mar 1, 2017Mar 1, 2017

• ADMRE

  Public
  Material used in the paper "On the accumulation of deleterious mutations during range expansions"

  C++

  •1•3•1•1•Updated Oct 14, 2016Oct 14, 2016