Repositories list

• metabolights-editor

  Public
  MetaboLights Online Editor (MOE) is a Single Page Application (SPA) built upon Angular 7, and Redux frameworks. MOE provides MetaboLights users and curators with an intuitive and easy to use interface to create, edit and annotate their studies online.

  metabolomicsmetabolomics-studiesmetabolomics-database

  TypeScript

  •

  Apache License 2.0

  •1•3•2•3•Updated Nov 8, 2024Nov 8, 2024

• MtblsWS-Py

  Public
  MTBLS Python-based REST service

  Python

  •1•8•0•6•Updated Oct 31, 2024Oct 31, 2024

• MetaboLights

  Public
  MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and concentrations, and experimental data from metabolic experiments.

  JavaScript

  •4•19•12•36•Updated Oct 31, 2024Oct 31, 2024

• metabolights-utils

  Public
  MetaboLigts-utils project contains lightweight data models and utilities to read and validate isa files.

  Python

  •

  Apache License 2.0

  •1•2•0•0•Updated Oct 23, 2024Oct 23, 2024

• SAFERnmr

  Public
  rnmrmetabolomics+ 1metabolomics-pipeline

  R

  •2•4•8•0•Updated Oct 22, 2024Oct 22, 2024

• compound-library-builder

  Public
  Houses scripts relating to building and validating our reference layer of chemical compound information

  Python

  •0•0•0•0•Updated Oct 18, 2024Oct 18, 2024

• mztabm2mtbls

  Public
  Python

  •1•1•2•0•Updated Aug 29, 2024Aug 29, 2024

• guides

  Public
  0•0•8•0•Updated Aug 29, 2024Aug 29, 2024

• bioconda-recipes

  Public
  Conda recipes for the bioconda channel.

  Shell

  •

  MIT License

  •3.3k•0•0•0•Updated Jun 21, 2024Jun 21, 2024

• mtbls-orcid-search

  Public
  HTML

  •0•0•0•0•Updated Jan 8, 2024Jan 8, 2024

• metabolights-isa-api

  Public
  A fork of ISA tools API

  Jupyter Notebook

  •

  Other

  •38•0•0•0•Updated Nov 1, 2023Nov 1, 2023

• mtbls-biohachathon27

  Public
  Metabolights repository for Bio Hackathon 2023 project 27

  0•0•0•0•Updated Oct 23, 2023Oct 23, 2023

• metabolights-galaxy-tools

  Public
  Repository to house all galaxy tools implemented by the MetaboLights team.

  R

  •0•1•0•0•Updated Jun 7, 2023Jun 7, 2023

• MetaboLightsBots

  Public
  Python

  •0•3•0•0•Updated Nov 15, 2022Nov 15, 2022

• lipidhome-web

  Public
  The web interface of LipidHome. Automatically exported from code.google.com/p/lipidhome.

  JavaScript

  •3•1•0•4•Updated Jun 29, 2022Jun 29, 2022

• galaxy

  Public
  Data intensive science for everyone.

  Python

  •

  Other

  •1k•0•0•0•Updated Apr 22, 2022Apr 22, 2022

• ISAcreatorPlugins

  Public
  Plugins developed for use in the ISAcreator. They should be placed in a 'Plugins' directory in the ISAcreator build environment.

  Java

  •2•1•0•0•Updated Mar 27, 2019Mar 27, 2019

• MTBLS-ChEBI

  Public
  MetaboLights to ChEBI

  Jupyter Notebook

  •

  Apache License 2.0

  •0•0•0•0•Updated Mar 19, 2019Mar 19, 2019

• Metabolights-Labs

  Public
  Online staging area to facilitate cloud based data analysis, re-analysis and submissions

  metabolomicsembl-ebimetabolights

  JavaScript

  •0•4•0•0•Updated Feb 1, 2019Feb 1, 2019

• MetaboLightsLabs-PythonCLI

  Public
  Python

  •2•1•0•1•Updated Nov 6, 2018Nov 6, 2018

• MetabolonUtils

  Public
  Java

  •

  Apache License 2.0

  •0•0•0•0•Updated Jul 2, 2018Jul 2, 2018

• MMIT

  Public
  METASPACE-MetaboLights Interface Tools

  Python

  •0•0•0•0•Updated Jun 18, 2018Jun 18, 2018

• isa-api

  Public
  ISA tools API

  Python

  •

  Other

  •38•0•0•0•Updated Oct 6, 2017Oct 6, 2017

• metaspace-website

  Public
  PHP

  •2•0•0•0•Updated Sep 12, 2016Sep 12, 2016

• mzml2isa

  Public
  Parser to get meta information from mzML file and parse relevant information to a ISA-Tab structure

  Python

  •6•0•0•0•Updated Jun 10, 2016Jun 10, 2016

• ISAcreator

  Public
  ISAcreator is a Java desktop application which allows for creation and editing of ISATab files. Led by Eamonn Maguire, Alejandra Gonzalez-Beltran and Philippe Rocca-Serra (Uni. of Oxford).

  Java

  •26•0•0•0•Updated Jun 10, 2015Jun 10, 2015

• ISAvalidator-ISAconverter-BIImanager

  Public
  The ISAvalidator, ISA converter and BII data manager tools

  Java

  •15•1•0•0•Updated Oct 28, 2014Oct 28, 2014

• BioInvIndex

  Public
  The web application, model, database persistence, services package and web services for the BII. Led by Eamonn Maguire (Uni. of Oxford), Tim Booth (NERC), Philippe Rocca-Serra (Uni. of Oxford), Mirek Dylag (IT Mentor Software Ltd.) and Marco Brandizi (EMBL-EBI))

  Java

  •13•1•0•0•Updated Oct 27, 2014Oct 27, 2014