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    74 repositories

    • MAVISp

      Public
      the MAVISp database for structural variants annotation
      Python
      •
      GNU General Public License v3.0
      •0•11•12•0•Updated Jan 17, 2025Jan 17, 2025

    • PDBminer

      Public
      scripts to find PBD structures for cancer driver proteins
      Python
      •
      GNU General Public License v3.0
      •5•29•0•0•Updated Jan 17, 2025Jan 17, 2025

    • Moonlight2R

      Public
      MoonlightR 2.0 development repository
      R
      •0•5•3•1•Updated Jan 16, 2025Jan 16, 2025

    • PPI2PDB

      Public
      Python
      •0•1•5•1•Updated Jan 15, 2025Jan 15, 2025

    • cancermuts

      Public
      Software for the automatic annotation of cancer mutations
      Python
      •
      GNU General Public License v3.0
      •1•3•5•0•Updated Jan 15, 2025Jan 15, 2025

    • ALL_markers

      Public
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

    • mavisp_data_collection

      Public
      GNU General Public License v3.0
      •0•2•29•0•Updated Jan 8, 2025Jan 8, 2025

    • MAVISp_allosigma2_workflow

      Public
      Workflow to process data from AlloSigma2 as done in MAVISp
      Python
      •
      GNU General Public License v3.0
      •0•0•1•1•Updated Jan 7, 2025Jan 7, 2025

    • Mol-Analysis

      Public
      Python
      •
      GNU General Public License v3.0
      •0•3•0•0•Updated Dec 18, 2024Dec 18, 2024

    • mutatex

      Public
      scripts and facilities for in-silico mutagenesis with FoldX
      Python
      •
      GNU General Public License v3.0
      •8•54•4•0•Updated Dec 10, 2024Dec 10, 2024

    • DCI_tombola

      Public
      0•0•0•0•Updated Dec 2, 2024Dec 2, 2024

    • pyinteraph2

      Public
      development repository for PyInteraph2
      Python
      •
      Other
      •8•22•3•0•Updated Nov 28, 2024Nov 28, 2024

    • RosettaDDGPrediction

      Public
      Python
      •
      GNU General Public License v3.0
      •12•56•3•0•Updated Nov 28, 2024Nov 28, 2024

    • MAVISp_CABSflex_pipeline

      Public
      CABSflex ensemble generation pipeline for MAVISp
      Scheme
      •
      GNU General Public License v3.0
      •0•0•1•1•Updated Nov 6, 2024Nov 6, 2024

    • MAVISp_loop_replacer

      Public
      A script designed to replace long loops in protein 3D structures with shorter versions
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Oct 29, 2024Oct 29, 2024

    • Moonlight2_GMA_case_studies

      Public
      Repository for case studies in which the Gene Methylation Analysis in Moonlight2R is used
      R
      •0•0•0•0•Updated Oct 23, 2024Oct 23, 2024

    • LipidDyn

      Public
      repository associated to our pipeline for lipid dynamics
      Python
      •
      GNU General Public License v3.0
      •3•8•1•0•Updated Jun 17, 2024Jun 17, 2024

    • MetaD-Analysis

      Public
      Python
      •0•0•0•0•Updated Jun 12, 2024Jun 12, 2024

    • DDR-candidates

      Public
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 6, 2024Jun 6, 2024

    • MoonlightR

      Public
      R
      •6•17•0•0•Updated May 15, 2024May 15, 2024

    • RaSP_workflow

      Public
      Python
      •
      Apache License 2.0
      •0•0•1•0•Updated Mar 1, 2024Mar 1, 2024

    • RNA_DE_pipeline

      Public
      ngs pipeline for childhood cancer data
      Python
      •
      Other
      •0•0•9•0•Updated Feb 29, 2024Feb 29, 2024

    • sentieon_wgs_pipeline

      Public
      Shell
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Oct 24, 2023Oct 24, 2023

    • PyInKnife2

      Public
      New version of the PyInKnife tool
      Python
      •
      GNU General Public License v3.0
      •2•2•2•4•Updated Oct 4, 2023Oct 4, 2023

    • CAMPP2

      Public
      The CAMPP2 R package
      R
      •0•0•6•3•Updated Sep 28, 2023Sep 28, 2023

    • Moonlight2_case_studies

      Public
      R
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Sep 19, 2023Sep 19, 2023

    • NPL4_MD_QM_cupric_ions

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 10, 2023May 10, 2023

    • CAMPP2_former_repository

      Public
      R
      •0•0•7•0•Updated Mar 30, 2023Mar 30, 2023

    • SNO_investigation_pipelines

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•2•0•Updated Jan 19, 2023Jan 19, 2023

    • FAK1_SNO

      Public
      repository associated with our publication on GSNOR deregulation in cancer and FAK S-nitrosylation
      Promela
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 20, 2022Dec 20, 2022