UPPMAX

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63 repositories

UPPMAX-documentation
Public
Python
•
Other
•1•5•30•0•Updated Dec 22, 2024Dec 22, 2024
programming_formalisms
Public
Repository for the Programming Formalisms course
sweden programming course english uppmax formalism nbis programming-formalisms formalisms
Shell
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GNU General Public License v3.0
•9•0•53•0•Updated Dec 22, 2024Dec 22, 2024
bianca_workshops
Public
R
•4•1•3•0•Updated Dec 21, 2024Dec 21, 2024
uppmax_intro_day_1
Public
Day 1 of the UPPMAX intro course
hpc cluster introduction intro uppmax computer-cluster uppsala-university uppsala
HTML
•
GNU General Public License v3.0
•0•0•0•0•Updated Dec 20, 2024Dec 20, 2024
naiss_file_transfer_course
Public
NAISS file transfer course
GNU General Public License v3.0
•0•0•7•0•Updated Dec 20, 2024Dec 20, 2024
ticket_304069
Public
RT ticket 304069
GNU General Public License v3.0
•0•0•0•0•Updated Dec 19, 2024Dec 19, 2024
uppmax_intro_python
Public
Shell
•0•0•1•0•Updated Dec 19, 2024Dec 19, 2024
HPC-python
Public
https://uppmax.github.io/HPC-python
Jupyter Notebook
•2•7•4•0•Updated Dec 6, 2024Dec 6, 2024
uppmax_board_presentation_20241203
Public
Presentation to the UPPMAX board on 2024-12-03
CSS
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GNU General Public License v3.0
•0•0•0•0•Updated Dec 3, 2024Dec 3, 2024
awk_course
Public
Teaching material for the UPPMAX Awk course
course awk uppmax uppsala
Shell
•
GNU General Public License v3.0
•1•0•1•0•Updated Dec 1, 2024Dec 1, 2024
R-python-julia-matlab-HPC
Public
Shell
•2•9•8•0•Updated Nov 25, 2024Nov 25, 2024
naiss_intermediate_bash_linux
Public
NAISS course about advanced Linux
GNU General Public License v3.0
•0•0•1•0•Updated Nov 24, 2024Nov 24, 2024
programming_formalisms_intro
Public
Programming formalisms intro
Creative Commons Attribution 4.0 International
•0•1•0•0•Updated Nov 18, 2024Nov 18, 2024
uppmax4DL
Public
UPPMAX for Deep Learning course material
HTML
•0•1•0•0•Updated Sep 30, 2024Sep 30, 2024
install-methods
Public
Install methods for UPPMAX modules plus some helper scripts
HTML
•3•8•1•1•Updated Sep 26, 2024Sep 26, 2024
ticket_299338
Public
Notes for RT ticket 299338
Python
•
GNU General Public License v3.0
•0•0•0•0•Updated Sep 20, 2024Sep 20, 2024
ticket_297538
Public
Notes for ticket 297538
Python
•
GNU General Public License v3.0
•0•0•0•0•Updated Sep 12, 2024Sep 12, 2024
ticket_295686
Public
0•0•1•0•Updated Sep 11, 2024Sep 11, 2024
DNABERT_2
Public
[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome
Shell
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Apache License 2.0
•68•0•0•0•Updated Sep 9, 2024Sep 9, 2024
ticket_298623
Public
Notes for ticket 298623
GNU General Public License v3.0
•0•0•0•0•Updated Sep 6, 2024Sep 6, 2024
ticket_297240
Public
Ticket 297240
Python
•
GNU General Public License v3.0
•0•0•0•0•Updated Aug 26, 2024Aug 26, 2024
ticket_296259
Public
Ticket 296259
sam rust-lang bam uppmax bianca sam-format bam-format vartrix
Shell
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GNU General Public License v3.0
•0•0•0•0•Updated Aug 6, 2024Aug 6, 2024
ticket_296149
Public
Ticket 296149
ssh rsync uppmax rackham darsync dardel
GNU General Public License v3.0
•0•0•0•0•Updated Jul 29, 2024Jul 29, 2024
ticket_295455
Public
Ticket 295455
R
•
GNU General Public License v3.0
•0•0•0•0•Updated Jul 26, 2024Jul 26, 2024
ticket_296478
Public
Notes and code for ticket 296478
R
•
GNU General Public License v3.0
•0•0•1•0•Updated Jul 26, 2024Jul 26, 2024
ticket_296660
Public
Notes and code for ticket 296660
GNU General Public License v3.0
•0•0•0•0•Updated Jul 25, 2024Jul 25, 2024
ticket_293272
Public
Ticket 293272
Shell
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GNU General Public License v3.0
•0•0•0•0•Updated May 31, 2024May 31, 2024
darsync
Public
Helper script to migrate data to Dardel
Python
•0•0•2•0•Updated May 3, 2024May 3, 2024
uppmax_on_dardel
Public
Using singularity to create a near-identical uppmax environment (experimental)
Singularity
•2•0•0•0•Updated Feb 9, 2024Feb 9, 2024
uppmax_intro_cases
Public
0•0•0•0•Updated Jan 14, 2024Jan 14, 2024