Repositories list

• expression-wrangler

  Public
  Wrangling our expression data with gpt-4o

  TypeScript

  •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

• ApiCommonModel

  Public
  Perl

  •

  Apache License 2.0

  •0•1•1•9•Updated Jan 15, 2025Jan 15, 2025

• web-monorepo

  Public
  A monorepo that contains all frontend code for VEuPathDB websites

  TypeScript

  •

  Apache License 2.0

  •0•2•190•23•Updated Jan 15, 2025Jan 15, 2025

• TestDatasets

  Public
  Apache License 2.0

  •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

• EbrcModelCommon

  Public
  Java

  •

  Apache License 2.0

  •2•1•4•1•Updated Jan 15, 2025Jan 15, 2025

• ApiCommonData

  Public
  Perl

  •

  Apache License 2.0

  •3•3•0•1•Updated Jan 15, 2025Jan 15, 2025

• ApidbSchema

  Public
  SQL and scripts to install the ApiDB schema

  PLSQL

  •

  Apache License 2.0

  •0•0•0•2•Updated Jan 15, 2025Jan 15, 2025

• orthoFinder-nextflow

  Public
  orthoFinder Nextflow workflow

  Python

  •

  MIT License

  •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

• puppet-postfix

  Public
  A simple puppet module for forwarding SMTP traffic through postfix

  Ruby

  •

  Other

  •8•0•0•0•Updated Jan 15, 2025Jan 15, 2025

• study-wrangler

  Public
  Code to keep study data tidy

  Dockerfile

  •

  Apache License 2.0

  •0•0•2•1•Updated Jan 15, 2025Jan 15, 2025

• ApiCommonWorkflow

  Public
  Perl

  •

  Apache License 2.0

  •1•0•0•3•Updated Jan 15, 2025Jan 15, 2025

• WDK

  Public
  Java

  •

  Apache License 2.0

  •4•1•13•6•Updated Jan 14, 2025Jan 14, 2025

• MicrobiomeWebsite

  Public
  R

  •

  Apache License 2.0

  •0•2•2•2•Updated Jan 14, 2025Jan 14, 2025

• ClinEpiWebsite

  Public
  CSS

  •

  Apache License 2.0

  •0•2•3•1•Updated Jan 14, 2025Jan 14, 2025

• ApiCommonWebsite

  Public
  Perl

  •

  Apache License 2.0

  •1•3•0•1•Updated Jan 14, 2025Jan 14, 2025

• OrthoMCLWebsite

  Public
  Apache License 2.0

  •0•0•0•1•Updated Jan 14, 2025Jan 14, 2025

• OrthoMCLModel

  Public
  Java

  •

  Apache License 2.0

  •0•0•0•1•Updated Jan 14, 2025Jan 14, 2025

• trna-scan-nextflow

  Public
  Nextflow workflow for tRNAScanTask

  Nextflow

  •

  Apache License 2.0

  •1•0•0•0•Updated Jan 14, 2025Jan 14, 2025

• jbrowse2

  Public
  Shell

  •

  Apache License 2.0

  •0•0•1•0•Updated Jan 13, 2025Jan 13, 2025

• EbrcWebsiteCommon

  Public
  Perl

  •

  Apache License 2.0

  •3•3•8•3•Updated Jan 12, 2025Jan 12, 2025

• websiteconf

  Public
  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Jan 12, 2025Jan 12, 2025

• veupathUtils

  Public
  A collection of general purpose R helper functions for use in the VEuPathDB project.

  R

  •

  Apache License 2.0

  •1•0•13•1•Updated Jan 10, 2025Jan 10, 2025

• conifer

  Public
  Configuration management tool for VEuPathDB GUS-based websites

  Python

  •

  Apache License 2.0

  •0•0•0•1•Updated Jan 10, 2025Jan 10, 2025

• vagrant-rocky9-webserver

  Public
  Testbed for building websites on Rocky 9 with Java 21 and Tomcat 9

  Shell

  •

  Apache License 2.0

  •0•0•0•0•Updated Jan 9, 2025Jan 9, 2025

• TuningManager

  Public
  Perl

  •

  Apache License 2.0

  •1•0•0•0•Updated Jan 9, 2025Jan 9, 2025

• SiteSearchData

  Public
  WDK Model and other code needed to run a WDK and generate reports to make JSON files to index in solr

  Python

  •

  Apache License 2.0

  •0•1•8•2•Updated Jan 8, 2025Jan 8, 2025

• gus-site-build-deploy

  Public
  Shell

  •

  Apache License 2.0

  •2•0•0•0•Updated Jan 8, 2025Jan 8, 2025

• OrthoMCLService

  Public
  Project containing OrthMCL-specific services, built on Ebrc common libraries

  Java

  •

  Apache License 2.0

  •0•0•0•0•Updated Jan 7, 2025Jan 7, 2025

• puppet-acme_vault

  Public
  Puppet

  •2•0•0•0•Updated Jan 7, 2025Jan 7, 2025

• packer-ebrc

  Public
  Packer templates for EBRC

  Shell

  •

  Apache License 2.0

  •0•0•0•0•Updated Jan 7, 2025Jan 7, 2025