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@VEuPathDB VEuPathDB Bioinformatics Resource Center

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    335 repositories

    • StaticContent

      Public
      HTML
      •
      Apache License 2.0
      •6•0•0•4•Updated Nov 13, 2024Nov 13, 2024

    • vdi-service

      Public
      vdi
      Kotlin
      •
      Apache License 2.0
      •0•0•39•0•Updated Nov 12, 2024Nov 12, 2024

    • vagrant-rocky8-webserver

      Public
      Testbed for building websites on Rocky 8 with Java 21 and Tomcat 10
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated Nov 12, 2024Nov 12, 2024

    • ApiCommonData

      Public
      Perl
      •
      Apache License 2.0
      •3•3•0•3•Updated Nov 12, 2024Nov 12, 2024

    • OrthoMCLModel

      Public
      Java
      •
      Apache License 2.0
      •0•0•0•1•Updated Nov 12, 2024Nov 12, 2024

    • OrthoMCLWebsite

      Public
      Apache License 2.0
      •0•0•0•1•Updated Nov 12, 2024Nov 12, 2024

    • MicrobiomeWebsite

      Public
      R
      •
      Apache License 2.0
      •0•2•2•1•Updated Nov 12, 2024Nov 12, 2024

    • ClinEpiWebsite

      Public
      CSS
      •
      Apache License 2.0
      •0•2•3•1•Updated Nov 12, 2024Nov 12, 2024

    • ApiCommonWebsite

      Public
      Perl
      •
      Apache License 2.0
      •1•3•0•1•Updated Nov 12, 2024Nov 12, 2024

    • EbrcWebsiteCommon

      Public
      Perl
      •
      Apache License 2.0
      •3•3•8•3•Updated Nov 12, 2024Nov 12, 2024

    • service-multi-blast

      Public
      Async BLAST+ query service and supporting libraries.
      libraryqueryservicefastablastncbincbi-blast
      Kotlin
      •
      Apache License 2.0
      •0•0•20•0•Updated Nov 12, 2024Nov 12, 2024

    • web-monorepo

      Public
      A monorepo that contains all frontend code for VEuPathDB websites
      TypeScript
      •
      Apache License 2.0
      •0•2•177•21•Updated Nov 12, 2024Nov 12, 2024

    • ApidbSchema

      Public
      SQL and scripts to install the ApiDB schema
      PLSQL
      •
      Apache License 2.0
      •0•0•0•3•Updated Nov 12, 2024Nov 12, 2024

    • FgpUtil

      Public
      Java
      •
      Apache License 2.0
      •2•0•2•3•Updated Nov 12, 2024Nov 12, 2024

    • ApiCommonWorkflow

      Public
      Perl
      •
      Apache License 2.0
      •1•0•0•4•Updated Nov 12, 2024Nov 12, 2024

    • ApiCommonModel

      Public
      Perl
      •
      Apache License 2.0
      •0•1•1•6•Updated Nov 11, 2024Nov 11, 2024

    • websiteconf

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Nov 11, 2024Nov 11, 2024

    • EbrcModelCommon

      Public
      Java
      •
      Apache License 2.0
      •2•1•4•2•Updated Nov 11, 2024Nov 11, 2024

    • vdi-component-common

      Public
      Common components for VDI projects
      Kotlin
      •
      Apache License 2.0
      •0•0•0•0•Updated Nov 11, 2024Nov 11, 2024

    • service-eda

      Public
      Repo containing EDA web service
      Java
      •
      Apache License 2.0
      •0•0•23•2•Updated Nov 11, 2024Nov 11, 2024

    • repeat-masker-nextflow

      Public
      nextflow workflow to modernize current repeatMasker workflow steps
      Perl
      •
      Apache License 2.0
      •1•1•0•0•Updated Nov 8, 2024Nov 8, 2024

    • blat-nextflow

      Public
      Nextflow Conversion of GenomeAlignWithGfClientTask
      Nextflow
      •
      Apache License 2.0
      •1•0•0•0•Updated Nov 8, 2024Nov 8, 2024

    • diamond-similarity-nextflow

      Public
      Nextflow workflow substituting diamond for blast
      Perl
      •
      MIT License
      •0•0•0•0•Updated Nov 8, 2024Nov 8, 2024

    • iprscan5-nextflow

      Public
      Nextflow Conversion of Iprscan5Task
      Python
      •
      MIT License
      •1•0•0•0•Updated Nov 8, 2024Nov 8, 2024

    • WDK

      Public
      Java
      •
      Apache License 2.0
      •4•1•12•4•Updated Nov 8, 2024Nov 8, 2024

    • TestDatasets

      Public
      Apache License 2.0
      •0•0•0•0•Updated Nov 8, 2024Nov 8, 2024

    • signalp-nextflow

      Public
      Nextflow
      •
      Apache License 2.0
      •0•0•0•0•Updated Nov 8, 2024Nov 8, 2024

    • CBIL

      Public
      Perl
      •
      Apache License 2.0
      •3•0•0•2•Updated Nov 7, 2024Nov 7, 2024

    • bulk-rnaseq-nextflow

      Public
      Bulk RNASeq Workflow
      Nextflow
      •
      MIT License
      •0•0•0•0•Updated Nov 7, 2024Nov 7, 2024

    • stack-eda-services

      Public
      Contains the production and development docker-compose files to deploy the entire set of EDA services
      Makefile
      •
      Apache License 2.0
      •0•0•5•1•Updated Nov 6, 2024Nov 6, 2024