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    84 repositories

    • nfdi4plants.knowledgebase

      Public
      This is the source repo for the nfdi4plants knowledge base webpage.
      slidestutorialsfaqhow-toknowledge-baseguides
      MDX
      •
      Creative Commons Attribution 4.0 International
      •31•2•2•0•Updated Nov 10, 2024Nov 10, 2024

    • training-material

      Public
      Training material of DataPLANT workshops and classes
      CSS
      •
      Creative Commons Attribution 4.0 International
      •1•0•0•0•Updated Nov 10, 2024Nov 10, 2024

    • Swate

      Public
      Excel Add-In for annotation of experimental data and computational workflows.
      educationbiologyontologyisaresearch-data-managementrdmminimal-information
      F#
      •
      MIT License
      •6•31•25•1•Updated Nov 10, 2024Nov 10, 2024

    • ARCTokenization

      Public
      Definition of controlled vocabulary tokens and library to tokenize ARC metadata into these tokens
      F#
      •
      MIT License
      •2•3•11•0•Updated Nov 8, 2024Nov 8, 2024

    • elab2arc

      Public
      A prototype to convert eLabFTW experiments to ARC assays
      HTML
      •2•0•6•0•Updated Nov 8, 2024Nov 8, 2024

    • arcmanager_backend

      Public
      FastAPI backend for the ARCmanager.
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Nov 7, 2024Nov 7, 2024

    • ARCtrl

      Public
      Library for management of Annotated Research Contexts (ARCs) using an in-memory representation and runtime-agnostic contract systems.
      fsharpisaarcrdmfair-datafable-libraries
      F#
      •
      MIT License
      •8•16•39•2•Updated Nov 7, 2024Nov 7, 2024

    • arc-rdm.org

      Public
      The official ARC website!
      Astro
      •2•1•4•0•Updated Nov 7, 2024Nov 7, 2024

    • ARCitect

      Public
      Cross-platform app to create and manage ARCs.
      Vue
      •6•9•25•1•Updated Nov 7, 2024Nov 7, 2024

    • nfdi4plants.github.io

      Public
      DataPLANT static website using Fornax
      Astro
      •
      MIT License
      •13•4•1•0•Updated Nov 7, 2024Nov 7, 2024

    • arc-validation-packages

      Public
      ARC validation packages for https://avpr.nfdi4plants.org maintained by DataPLANT
      F#
      •
      MIT License
      •0•0•1•0•Updated Nov 6, 2024Nov 6, 2024

    • arcmanager_frontend

      Public
      Web-based application for creating and managing your ARCs directly on the DataHUB.
      Vue
      •
      GNU Affero General Public License v3.0
      •0•0•1•0•Updated Nov 5, 2024Nov 5, 2024

    • isa-ro-crate-profile

      Public
      MIT License
      •0•4•9•1•Updated Nov 2, 2024Nov 2, 2024

    • arc-ro-crate-profile

      Public
      MIT License
      •0•0•4•1•Updated Nov 1, 2024Nov 1, 2024

    • dataplan

      Public
      DataPLAN is a Data Management Plan (DMP) generator developed by DataPLANT
      documentgeneration
      HTML
      •
      GNU General Public License v3.0
      •7•3•20•0•Updated Oct 31, 2024Oct 31, 2024

    • arc-cwl-ro-crate-profile

      Public
      MIT License
      •0•0•8•1•Updated Oct 31, 2024Oct 31, 2024

    • Swate-templates

      Public
      A collection of templates for Swate (https://github.com/nfdi4plants/Swate).
      F#
      •18•4•7•1•Updated Oct 31, 2024Oct 31, 2024

    • arc-to-rocrate

      Public
      F#
      •1•1•4•0•Updated Oct 30, 2024Oct 30, 2024

    • ARC-specification

      Public
      13•12•10•0•Updated Oct 29, 2024Oct 29, 2024

    • BOAT-Builder-for-Ontology-ARC-Templates

      Public
      This tool/website is for a user friendly creating of an ARC template (essay or study) out of your free text protocols with self-annotated ontology labeled terms. These templates can be used in your ARC afterwards.
      F#
      •0•2•7•0•Updated Oct 28, 2024Oct 28, 2024

    • nfdi4plants_ontology

      Public
      An intermediate ontology for plants used by DataPLANT to fill the ontology gap
      ontologybrokernfdi4plantsdataplantdbpo
      F#
      •
      MIT License
      •10•7•4•0•Updated Oct 28, 2024Oct 28, 2024

    • arc-vs-code

      Public
      Vue
      •
      MIT License
      •0•1•1•0•Updated Oct 27, 2024Oct 27, 2024

    • ARCtrl.NET

      Public
      This library contains reader functions to interact with the different formats present in an ARC
      F#
      •
      MIT License
      •1•3•3•0•Updated Oct 21, 2024Oct 21, 2024

    • Nfdi4Plants.Fornax

      Public archive
      Fornax library and template for nfdi4plants/web-components used as docs framework.
      JavaScript
      •
      MIT License
      •0•2•5•0•Updated Oct 21, 2024Oct 21, 2024

    • web-components-docs

      Public archive
      JavaScript
      •
      MIT License
      •2•0•0•0•Updated Oct 21, 2024Oct 21, 2024

    • web-components

      Public archive
      DataPLANT branded web-components for diverse elements. Used in knowledgebase and main pages.
      TypeScript
      •3•4•4•0•Updated Oct 21, 2024Oct 21, 2024

    • DataHUB

      Public
      This repository may be used to collect issues, bugs or similar regarding the DataPLANT DataHUB.
      Shell
      •
      MIT License
      •3•1•20•0•Updated Oct 10, 2024Oct 10, 2024

    • ols4

      Public
      DataPLANT terminology service by using the version 4 of the EMBL-EBI Ontology Lookup Service (OLS)
      Java
      •
      Apache License 2.0
      •21•0•0•0•Updated Sep 25, 2024Sep 25, 2024

    • ARCCommander

      Public
      Tool to manage your ARCs
      F#
      •
      MIT License
      •9•12•24•1•Updated Sep 24, 2024Sep 24, 2024

    • ena2swate

      Public
      Generate SWATE template from ENA checklists
      CSS
      •1•0•0•0•Updated Sep 17, 2024Sep 17, 2024