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    19 repositories

    • nurikit

      Public
      *The* fundamental software platform for chem- and bio-informatics
      C++
      •
      Apache License 2.0
      •0•5•14•0•Updated Oct 28, 2024Oct 28, 2024

    • CSearch

      Public
      CSearch: Chemical Space Search via Virtual Synthesis and Global Optimization
      global-optimizationcomputer-aided-drug-designchemical-space-searchvirtual-synthesis
      Python
      •
      MIT License
      •0•1•0•0•Updated Oct 18, 2024Oct 18, 2024

    • shared-hooks

      Public
      Shell
      •
      MIT License
      •0•0•0•0•Updated Oct 15, 2024Oct 15, 2024

    • seoklab.github.io

      Public
      A modern seoklab homepage
      SCSS
      •
      Creative Commons Attribution Share Alike 4.0 International
      •914•0•0•0•Updated Sep 20, 2024Sep 20, 2024

    • openfold

      Public
      Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
      Python
      •
      Apache License 2.0
      •534•0•0•0•Updated Sep 6, 2024Sep 6, 2024

    • ComMat

      Public
      Community-based Deep Learning and Antibody H3 Loop Modeling
      Python
      •
      MIT License
      •0•1•1•0•Updated Aug 28, 2024Aug 28, 2024

    • galaxydock_dl

      Public
      galaxydock_dl for public
      Fortran
      •
      MIT License
      •1•3•0•0•Updated Aug 10, 2024Aug 10, 2024

    • Uni-Fold

      Public
      An open-source platform for developing protein models beyond AlphaFold.
      Python
      •
      Apache License 2.0
      •73•0•0•0•Updated May 28, 2024May 28, 2024

    • alphafold

      Public
      A seoklab-flavored version of AlphaFold2.
      Python
      •
      Apache License 2.0
      •2.2k•0•0•0•Updated Apr 24, 2024Apr 24, 2024

    • RoseTTAFold-All-Atom

      Public
      Python
      •
      Other
      •111•1•0•0•Updated Apr 4, 2024Apr 4, 2024

    • ldld

      Public
      Learning Deep Learning Deeply
      tutorialdeep-learningjupyternotebook
      Jupyter Notebook
      •
      MIT License
      •0•5•0•0•Updated Jan 9, 2024Jan 9, 2024

    • GalaxyWater-CNN

      Public
      3D-CNN based water position prediction method
      Python
      •
      Apache License 2.0
      •2•10•3•0•Updated Nov 20, 2023Nov 20, 2023

    • Public-practice

      Public
      Public Files for the lecture and practice etc
      Shell
      •1•1•0•0•Updated Oct 24, 2023Oct 24, 2023

    • OmegaFold

      Public
      OmegaFold Release Code
      Python
      •
      Apache License 2.0
      •78•0•0•0•Updated Sep 23, 2022Sep 23, 2022

    • csblast

      Public
      Context-specific mutation probabilities for protein sequencing searching.
      C++
      •
      Other
      •3•0•0•0•Updated Aug 3, 2022Aug 3, 2022

    • ncbi-blast-legacy

      Public
      legacy blast
      C
      •
      Other
      •3•0•0•0•Updated Aug 1, 2022Aug 1, 2022

    • .github

      Public
      Default community health files for seoklab
      health
      0•0•0•0•Updated Apr 9, 2022Apr 9, 2022

    • GPCR_binding_cavity_volume_calculation

      Public archive
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Dec 7, 2021Dec 7, 2021

    • GalaxyPepDock

      Public
      Protein-peptide docking based on interaction similarity
      Shell
      •
      GNU General Public License v3.0
      •0•0•1•0•Updated Feb 6, 2018Feb 6, 2018