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v1.7 - Lightweight database & harmonized gene symbols

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@oschwengers oschwengers released this 24 Feb 15:18
· 154 commits to main since this release

This is the seventh minor release (v1.7) introducing a lightweight database version, various gene symbol improvements, and a metagenome mode.

Compatible database scheme version: 5

New features:

  • Introduced a lightweight database version: #196 (Thanks @tseemann))
  • Introduced an operon gene symbol harmonization feature: #190
  • Introduced a simple metagenome mode: #191
  • Added IS transposase to protein expert system: #10

Improvements:

  • Improved CDS gene symbols: #186
  • Amended tRNA & rRNA gene symbols: #192
  • Amended uppercase ncRNA gene symbols: #194
  • Added model IDs and dbxrefs to expert annotation systems: #183 (Thanks @davidtong28)
  • Updated to Pyrodigal v2.1.0 fixing a bug in the SD motif-detection on reverse contig edges: 599fe70

Fixes:

  • Fixed system-wide db path stored in software volume: #177 (Thanks @standage)