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export ASAN_OPTIONS=detect_container_overflow=0 #187

export ASAN_OPTIONS=detect_container_overflow=0

export ASAN_OPTIONS=detect_container_overflow=0 #187

Workflow file for this run

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main]
pull_request:
branches: [main]
name: R package
permissions: read-all
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
container: ${{ matrix.config.container }}
name: ${{ matrix.config.name }}
strategy:
fail-fast: false
matrix:
config:
- {os: macos-13, r: 'release', container: null, name: 'macos-13-r-release'}
- {os: macos-14, r: 'release', container: null, name: 'macos-14-r-release'}
- {os: ubuntu-latest, r: 'release', container: null, name: 'ubuntu-latest-r-release'}
- {os: windows-latest, r: 'release', container: null, name: 'windows-latest-r-release'}
- {os: macos-13, r: 'devel', container: null, name: 'macos-13-r-devel'}
- {os: macos-14, r: 'devel', container: null, name: 'macos-14-r-devel'}
- {os: ubuntu-latest, r: 'devel', container: null, name: 'ubuntu-latest-r-devel'}
- {os: windows-latest, r: 'devel', container: null, name: 'windows-latest-r-devel'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/ubuntu-gcc12:latest' }, name: 'r-devel-linux-x86_64-debian-gcc'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/ubuntu-clang:latest' }, name: 'r-devel-linux-x86_64-debian-clang'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/atlas:latest' }, name: 'ATLAS'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/c23:latest' }, name: 'C23'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/clang-asan:latest' }, name: 'clang-ASAN'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/clang16:latest' }, name: 'clang16'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/clang17:latest' }, name: 'clang17'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/clang18:latest' }, name: 'clang18'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/clang19:latest' }, name: 'clang19'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/clang20:latest' }, name: 'clang20'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/donttest:latest' }, name: 'donttest'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/gcc13:latest' }, name: 'gcc13'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/gcc13:latest' }, name: 'gcc14'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/intel:latest' }, name: 'intel'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/mkl:latest' }, name: 'mkl'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/nold:latest' }, name: 'noLD'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/noremap:latest' }, name: 'noRemap'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/valgrind:latest' }, name: 'rchk'}
- {os: ubuntu-latest, container: { image: 'ghcr.io/r-hub/containers/valgrind:latest' }, name: 'valgrind'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Setup pandoc
if: matrix.config.container == null
uses: r-lib/actions/setup-pandoc@v2
- name: Setup R
if: matrix.config.container == null
uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
- name: Restore R package cache
uses: actions/cache@v4
with:
path: ~/.cache/R
key: ${{ runner.os }}-r-${{ matrix.config.r }}-cache
- name: Install libpng (macOS)
if: matrix.config.os == 'macos-14' && matrix.config.r == 'devel'
run: |
curl -LO https://mac.r-project.org/bin/darwin20/arm64/libpng-1.6.38-darwin.20-arm64.tar.xz
sudo tar -xvf libpng-1.6.38-darwin.20-arm64.tar.xz -C /
echo "PKG_CONFIG_PATH=/opt/R/arm64/lib/pkgconfig" >> $GITHUB_ENV
- name: Install dependencies
run: |
Rscript -e 'if (!requireNamespace("pak", quietly = TRUE)) { install.packages("pak", repos = "https://r-lib.github.io/p/pak/dev/") }'
Rscript -e 'pak::pkg_install("decor", dependencies = TRUE)'
Rscript -e 'pak::pkg_install("rcmdcheck", dependencies = TRUE)'
Rscript -e 'pak::pkg_install("pkgbuild", dependencies = TRUE)'
Rscript -e 'pak::pkg_install(".", dependencies = TRUE)'
working-directory: ./rpkg
- name: Check
run: |
Rscript -e 'pkgbuild::check_build_tools(debug = TRUE)'
Rscript -e 'rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), build_args = "--no-manual", error_on = "error")'
working-directory: ./rpkg
- name: Save R package cache
uses: actions/cache@v4
with:
path: ~/.cache/R
key: ${{ runner.os }}-r-${{ matrix.config.r }}-cache