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Release 0.2.0 cleanup #4

Release 0.2.0 cleanup

Release 0.2.0 cleanup #4

Triggered via pull request April 3, 2024 21:58
@paldaypalday
synchronize #52
pa/cleanup
Status Success
Total duration 1m 20s
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6 warnings
YASStyle: docs/make.jl#L4
[JuliaFormatter] reported by reviewdog 🐶 Raw Output: docs/make.jl:4:-makedocs( docs/make.jl:5:- sitename = "MixedModelsPermutations", docs/make.jl:6:- doctest = true, docs/make.jl:7:- warnonly=[:cross_references], docs/make.jl:8:- pages = [ docs/make.jl:9:- "index.md", docs/make.jl:10:- ], docs/make.jl:11:-) docs/make.jl:4:+makedocs(; sitename="MixedModelsPermutations", docs/make.jl:5:+ doctest=true, docs/make.jl:6:+ warnonly=[:cross_references], docs/make.jl:7:+ pages=["index.md"])
YASStyle: src/nonparametricbootstrap.jl#L40
[JuliaFormatter] reported by reviewdog 🐶 Raw Output: src/nonparametricbootstrap.jl:40:-function nonparametricbootstrap( src/nonparametricbootstrap.jl:41:- rng::AbstractRNG, src/nonparametricbootstrap.jl:42:- n::Integer, src/nonparametricbootstrap.jl:43:- morig::LinearMixedModel{T}; src/nonparametricbootstrap.jl:44:- progress=true, src/nonparametricbootstrap.jl:45:- β=coef(morig), src/nonparametricbootstrap.jl:46:- residual_method=residuals_from_blups, src/nonparametricbootstrap.jl:47:- blup_method=ranef, src/nonparametricbootstrap.jl:48:- inflation_method=inflation_factor) where {T} src/nonparametricbootstrap.jl:40:+function nonparametricbootstrap(rng::AbstractRNG, src/nonparametricbootstrap.jl:41:+ n::Integer, src/nonparametricbootstrap.jl:42:+ morig::LinearMixedModel{T}; src/nonparametricbootstrap.jl:43:+ progress=true, src/nonparametricbootstrap.jl:44:+ β=coef(morig), src/nonparametricbootstrap.jl:45:+ residual_method=residuals_from_blups, src/nonparametricbootstrap.jl:46:+ blup_method=ranef, src/nonparametricbootstrap.jl:47:+ inflation_method=inflation_factor) where {T}
YASStyle: src/nonparametricbootstrap.jl#L64
[JuliaFormatter] reported by reviewdog 🐶 Raw Output: src/nonparametricbootstrap.jl:64:- ( src/nonparametricbootstrap.jl:65:- objective = model.objective, src/nonparametricbootstrap.jl:66:- σ = model.σ, src/nonparametricbootstrap.jl:67:- β = NamedTuple{β_names}(fixef!(βsc, model)), src/nonparametricbootstrap.jl:68:- se = SVector{p,T}(stderror!(βsc, model)), src/nonparametricbootstrap.jl:69:- θ = SVector{k,T}(getθ!(θsc, model)), src/nonparametricbootstrap.jl:70:- ) src/nonparametricbootstrap.jl:63:+ return (objective=model.objective, src/nonparametricbootstrap.jl:64:+ σ=model.σ, src/nonparametricbootstrap.jl:65:+ β=NamedTuple{β_names}(fixef!(βsc, model)), src/nonparametricbootstrap.jl:66:+ se=SVector{p,T}(stderror!(βsc, model)), src/nonparametricbootstrap.jl:67:+ θ=SVector{k,T}(getθ!(θsc, model)))
YASStyle: src/permutation.jl#L80
[JuliaFormatter] reported by reviewdog 🐶 Raw Output: src/permutation.jl:80:-function permutation( src/permutation.jl:81:- rng::AbstractRNG, src/permutation.jl:82:- n::Integer, src/permutation.jl:83:- morig::LinearMixedModel{T}; src/permutation.jl:84:- progress=true, src/permutation.jl:85:- β::AbstractVector{T}=zeros(T, length(coef(morig))), src/permutation.jl:86:- residual_permutation=:signflip, src/permutation.jl:87:- residual_method=residuals, src/permutation.jl:88:- blup_method=ranef, src/permutation.jl:89:- inflation_method=inflation_factor, src/permutation.jl:90:-) where {T} src/permutation.jl:80:+function permutation(rng::AbstractRNG, src/permutation.jl:81:+ n::Integer, src/permutation.jl:82:+ morig::LinearMixedModel{T}; src/permutation.jl:83:+ progress=true, src/permutation.jl:84:+ β::AbstractVector{T}=zeros(T, length(coef(morig))), src/permutation.jl:85:+ residual_permutation=:signflip, src/permutation.jl:86:+ residual_method=residuals, src/permutation.jl:87:+ blup_method=ranef, src/permutation.jl:88:+ inflation_method=inflation_factor,) where {T}
YASStyle: src/permutation.jl#L108
[JuliaFormatter] reported by reviewdog 🐶 Raw Output: src/permutation.jl:108:- ( src/permutation.jl:109:- objective = model.objective, src/permutation.jl:110:- σ = model.σ, src/permutation.jl:111:- β = NamedTuple{β_names}(fixef!(βsc, model)), src/permutation.jl:112:- se = SVector{p,T}(stderror!(βsc, model)), src/permutation.jl:113:- θ = SVector{k,T}(getθ!(θsc, model)), src/permutation.jl:114:- ) src/permutation.jl:106:+ return (objective=model.objective, src/permutation.jl:107:+ σ=model.σ, src/permutation.jl:108:+ β=NamedTuple{β_names}(fixef!(βsc, model)), src/permutation.jl:109:+ se=SVector{p,T}(stderror!(βsc, model)), src/permutation.jl:110:+ θ=SVector{k,T}(getθ!(θsc, model)))
YASStyle
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: julia-actions/setup-julia@v1, actions/cache@4d4ae6ae148a43d0fd1eda1800170683e9882738, pyTooling/Actions/with-post-step@adef08d3bdef092282614f3b683897cefae82ee3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.