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# docker-cellranger | ||
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[![travis badge][travis_badge]][travis_base] | ||
[![docker badge][docker_badge]][docker_base] | ||
[![docker badge][docker_version]][docker_base] | ||
[![docker badge][automated_badge]][docker_base] | ||
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A Dockerfile to build a docker container for [10X Genomics CellRanger] installation. By default, the container runs the `cellranger` main command as entrypoint: | ||
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docker run papaemmelab/docker-cellranger --help | ||
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[docker_base]: https://hub.docker.com/r/papaemmelab/docker-cellranger | ||
[docker_badge]: https://img.shields.io/docker/build/papaemmelab/docker-cellranger.svg | ||
[automated_badge]: https://img.shields.io/docker/automated/papaemmelab/docker-cellranger.svg | ||
[travis_badge]: https://img.shields.io/travis/papaemmelab/docker-cellranger.svg | ||
[docker_version]: https://img.shields.io/badge/version-v3.1.0-red | ||
[automated_badge]: https://img.shields.io/badge/docker%20build-automated-blue | ||
[travis_badge]: https://travis-ci.com/papaemmelab/docker-cellranger.svg?branch=master | ||
[travis_base]: https://travis-ci.com/papaemmelab/docker-cellranger | ||
[10X Genomics CellRanger]: https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/what-is-cell-ranger |