feature(profiling): updated schema issue bioboxes#207

container/profiling/schema.yaml

@@ -1,56 +1,69 @@
 ---
-  $schema: "http://json-schema.org/draft-04/schema#"
-  title: "Bioboxes Profiling validator"
-  type: "object"
-  properties: 
-    version: 
-      type: "string"
-      pattern: "^1.0.\\d+$"
-    arguments: 
-      type: "object"
-      required: 
-        - "reads"
+"$schema": http://json-schema.org/draft-04/schema#
+title: Bioboxes Profiling
+type: object
+properties:
+  version:
+    type: string
+    pattern: "^1.0.\\d+$"
+  arguments:
+    type: array
+    required:
+    - fastq
+    - database
+    additionalItems: false
+    minItems: 1
+    items:
+      oneOf:
+      - "$ref": "#/definitions/fastq"
+      - "$ref": "#/definitions/database"
+      - "$ref": "#/definitions/cache"
+required:
+- version
+- arguments
+additionalProperties: false
+definitions:
+  fastq:
+    type: object
+    minItems: 1
+    required:
+    - fastq
+    properties:
+      fastq:
+        "$ref": "#/definitions/values"
+  values:
+    type: array
+    uniqueItems: true
+    minItems: 1
+    items:
+      type: object
       additionalProperties: false
-      properties: 
-        reads: 
-          $ref: "#/definitions/fastq"
-        databases: 
-          $ref: "#/definitions/databases"
-        cache: {}
-  required: 
-    - "version"
-    - "arguments"
-  additionalProperties: false
-  definitions: 
-    fastq: 
-      type: "array"
-      minItems: 1
-      items: 
-        type: "object"
-        additionalProperties: false
-        required: 
-          - "format"
-          - "path"
-        properties: 
-          format: 
-            enum: 
-              - "bioboxes.org:/fastq"
-          path: {}
-    databases: 
-      type: "object"
-      required: 
-        - "taxonomy"
-      properties: 
-        taxonomy: 
-          type: "object"
-          required: 
-            - "path"
-            - "format"
-          properties: 
-            format: 
-              enum: 
-                - "bioboxes.org:/taxonomy_ncbi_dumps"
-            type: 
-              enum: 
-                - "ncbi"
-            path: {}
+      required:
+      - type
+      - value
+      properties:
+        type: {}
+        value: {}
+  cache:
+    type: object
+    required:
+    - cache
+    properties:
+      cache:
+        required:
+        - type
+        - value
+        properties:
+          type: {}
+          value: {}
+  database:
+    required:
+    - database
+    properties:
+      database:
+        required:
+        - type
+        - value
+        properties:
+          type: {}
+          value: {}